RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 RFC2P35250 354 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 FXR1P51114 621 aaKnown RBP eCLIP14.42□□□□□ -0.1
USE1-209ENST00000601592 ADAM17P78536 824 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 PRKCEQ02156 737 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 RBL2Q08999 1139 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 UGCGQ16739 394 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 NCAPH2Q6IBW4 605 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 C16orf59Q7L2K0 433 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 RSPH3Q86UC2 560 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 SLFN12Q8IYM2 578 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 RDM1Q8NG50 284 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 LRCH3Q96II8 777 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 MAFBQ9Y5Q3 323 aaPredicted RBP14.42□□□□□ -0.1
USE1-209ENST00000601592 ARID2Q68CP9 1835 aa14.42□□□□□ -0.1
USE1-209ENST00000601592 MICAL3Q7RTP6 2002 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 RSPH10B2B2RC85 870 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 K7ELQ4 463 aaPredicted RBP14.41□□□□□ -0.1
USE1-209ENST00000601592 OATP04181 439 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 PFKMP08237 780 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 RSPH10BP0C881 870 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 ACTN1P12814 892 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 ATP4AP20648 1035 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 TXKP42681 527 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 CUL4AQ13619 759 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 ZNF174Q15697 407 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 LRIT3Q3SXY7 679 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
USE1-209ENST00000601592 TAF2Q6P1X5 1199 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 BANK1Q8NDB2 785 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 DNAJB3Q8WWF6 145 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 BBXQ8WY36 941 aaPredicted RBP14.41□□□□□ -0.1
USE1-209ENST00000601592 HAS1Q92839 578 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 SEPT9Q9UHD8 586 aaPredicted RBP14.41□□□□□ -0.1
USE1-209ENST00000601592 VAV3Q9UKW4 847 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 COL1A2P08123 1366 aa14.41□□□□□ -0.1
USE1-209ENST00000601592 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
USE1-209ENST00000601592 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 EML1O00423 815 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 ZNF862O60290 1169 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 PARNO95453 639 aaKnown RBP14.4□□□□□ -0.1
USE1-209ENST00000601592 PPP2R5CQ13362 524 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 NBR1Q14596 966 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 ZNF484Q5JVG2 852 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 MARCH8Q5T0T0 291 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 NRBP2Q9NSY0 501 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 PCDHA12Q9UN75 941 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 CEP131Q9UPN4 1083 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 PTPRSQ13332 1948 aa14.4□□□□□ -0.1
USE1-209ENST00000601592 VPS37CA5D8V6 355 aaPredicted RBP14.39□□□□□ -0.11
USE1-209ENST00000601592 M0QZ92 97 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 NBNO60934 754 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 CAND2O75155 1236 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 U2AF2P26368 475 aaKnown RBP eCLIP14.39□□□□□ -0.11
USE1-209ENST00000601592 KLRC1P26715 233 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 TMEM62Q0P6H9 643 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 TRAF7Q6Q0C0 670 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 B3GNT9Q6UX72 402 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 METTL13Q8N6R0 699 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 HERVK_113Q902F9 699 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 TTC12Q9H892 705 aaPredicted RBP14.39□□□□□ -0.11
USE1-209ENST00000601592 CXXC1Q9P0U4 656 aaPredicted RBP14.39□□□□□ -0.11
USE1-209ENST00000601592 PCDHA2Q9Y5H9 948 aa14.39□□□□□ -0.11
USE1-209ENST00000601592 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 HSP90AA1P07900 732 aaKnown RBP14.38□□□□□ -0.11
USE1-209ENST00000601592 OR52Z1P0C646 297 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 PSMC5P62195 406 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
USE1-209ENST00000601592 CYP4A11Q02928 519 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 MBTPS1Q14703 1052 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 MTERF2Q49AM1 385 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 CNKSR3Q6P9H4 555 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 VWCEQ96DN2 955 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 GINS2Q9Y248 185 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 CDY2AQ9Y6F7 541 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
USE1-209ENST00000601592 LAMA3Q16787 3333 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 TMEM150BA6NC51 233 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 POTEMA6NI47 508 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.11
USE1-209ENST00000601592 C22orf31O95567 290 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 P4HBP07237 508 aaKnown RBP14.37□□□□□ -0.11
USE1-209ENST00000601592 PDCP20941 246 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 QARSP47897 775 aaKnown RBP14.37□□□□□ -0.11
USE1-209ENST00000601592 KCNJ6P48051 423 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 CLCN3P51790 818 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 TBC1D8BQ0IIM8 1120 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
USE1-209ENST00000601592 GPNMBQ14956 572 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 EPHA7Q15375 998 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 XKR3Q5GH77 459 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 IER5Q5VY09 327 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 PLA2G4FQ68DD2 849 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms