RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 GOLGA8JA6NMD2 632 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 COPEO14579 308 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 KRT14P02533 472 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 RFX6Q8HWS3 928 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 MCUQ8NE86 351 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 WDR62O43379 1518 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 RASA4BC9J798 803 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 H0Y3Z8 333 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 RASA4O43374 803 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 HOXB7P09629 217 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 TFCP2Q12800 502 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 INPP5AQ14642 412 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 DYMQ7RTS9 669 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 H0YC42 278 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 AREL1O15033 823 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 CYTH1Q15438 398 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SCG3Q8WXD2 468 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 GPAA1O43292 621 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 PPIP5K2O43314 1243 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ADAM9Q13443 819 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 PLAAQ9Y263 795 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 MAFGO15525 162 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 GAP43P17677 238 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 IFRD2Q12894 506 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 GCOM2Q9BZD3 368 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 PIK3R2O00459 728 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 CYTH3O43739 400 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SLC9A1P19634 815 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SERPINB8P50452 374 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 NR5A1Q13285 461 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ADAT2Q7Z6V5 191 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ZNF839A8K0R7 811 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ANXA13P27216 316 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 C2orf54Q08AI8 447 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 RHOT2Q8IXI1 618 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 ELAC2Q9BQ52 826 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 PSMA4P25789 261 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 STX3Q13277 289 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 CAPRIN1Q14444 709 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
SHANK2-218ENST00000601538 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
SHANK2-218ENST00000601538 TBKBP1A7MCY6 615 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 HSPD1P10809 573 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 SP4Q02446 784 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 EXOC8Q8IYI6 725 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 PPM1KQ8N3J5 372 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 VCAM1P19320 739 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 PSMA3P25788 255 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 BRD8Q9H0E9 1235 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 EML4Q9HC35 981 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 PPP6R2O75170 966 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 MESDQ14696 234 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 NLRX1Q86UT6 975 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 BLZF1Q9H2G9 400 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 ORC4O43929 436 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms