RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SENP6Q9GZR1 1112 aaPredicted RBP22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 ZSWIM4Q9H7M6 989 aa22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 MYH9P35579 1960 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-222ENST00000600320 ZBTB39O15060 712 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 GRB10Q13322 594 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 ITGA7Q13683 1181 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 POTEGQ6S5H5 508 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 CLEC17AQ6ZS10 378 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 C4orf19Q8IY42 314 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 CKAP2LQ8IYA6 745 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 ATP8B4Q8TF62 1192 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 VTI1AQ96AJ9 217 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 PLIN2Q99541 437 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 CCSER1Q9C0I3 900 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 C11orf49Q9H6J7 331 aa22.42■■□□□ 1.18
SHKBP1-222ENST00000600320 LYPLA2O95372 231 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 OATP04181 439 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 UBA7P41226 1012 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 SLC26A2P50443 739 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 HIC1Q14526 733 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 KARSQ15046 597 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 ZRSR1Q15695 479 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 TPRNQ4KMQ1 711 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 HYIQ5T013 277 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 LRRC15Q8TF66 581 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 HDAC6Q9UBN7 1215 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 STK24Q9Y6E0 443 aa22.41■■□□□ 1.18
SHKBP1-222ENST00000600320 SMIM10L2AP0DMW4 78 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 SMIM10L2BP0DMW5 78 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 TMEM119Q4V9L6 283 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 RESP18Q5W5W9 173 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 PLA2G4FQ68DD2 849 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 ADALQ6DHV7 355 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 ANO5Q75V66 913 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 KCNK18Q7Z418 384 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 SLC43A3Q8NBI5 491 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 SH2D3AQ9BRG2 576 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 DDX19AQ9NUU7 478 aaKnown RBP22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 KIAA1024Q9UPX6 916 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 TRPC6Q9Y210 931 aa22.4■■□□□ 1.18
SHKBP1-222ENST00000600320 A0A087X0B3 334 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 A0A0U1RQG5 324 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 DDX11L8A8MPP1 907 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 HBP1O60381 514 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 DKC1O60832 514 aaKnown RBP eCLIP22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 INSRRP14616 1297 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 ATN1P54259 1190 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 XKR3Q5GH77 459 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 NECAB2Q7Z6G3 386 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 TMEM87AQ8NBN3 555 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 PIGOQ8TEQ8 1089 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 TRAPPC12Q8WVT3 735 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 BBXQ8WY36 941 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 FAM167AQ96KS9 214 aa22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 SEPT9Q9UHD8 586 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-222ENST00000600320 KDM3AQ9Y4C1 1321 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 ZBTB42B2RXF5 422 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 ARVCFO00192 962 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 MUTP22033 750 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 YWHABP31946 246 aaKnown RBP22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 NPEPPSP55786 919 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 MLLT1Q03111 559 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 PPFIA1Q13136 1202 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 FAM47CQ5HY64 1035 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 SLC39A5Q6ZMH5 540 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 ZBTB10Q96DT7 871 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 NIFKQ9BYG3 293 aaKnown RBP22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 SETD4Q9NVD3 440 aa22.38■■□□□ 1.17
SHKBP1-222ENST00000600320 E9PMD0 336 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 SLC26A4O43511 780 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 GADD45BO75293 160 aaPredicted RBP22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 PLCG1P19174 1290 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 CMA1P23946 247 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 HOXC8P31273 242 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 CDK7P50613 346 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 ZNF200P98182 395 aaPredicted RBP22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 TARBP2Q15633 366 aaKnown RBP22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 GRIK4Q16099 956 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 GDF6Q6KF10 455 aaPredicted RBP22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 NFRKBQ6P4R8 1299 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 SESTD1Q86VW0 696 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 C7orf31Q8N865 590 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 LMBR1Q8WVP7 490 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 CALML4Q96GE6 196 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 CEP89Q96ST8 783 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 PANK2Q9BZ23 570 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 NRBP2Q9NSY0 501 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 GTF2IRD1Q9UHL9 959 aa22.37■■□□□ 1.17
SHKBP1-222ENST00000600320 A0A1W2PQ27 194 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 A0A1W2PQ64 194 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 A0A1W2PQD8 194 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 TXLNAP40222 546 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 IGBP1P78318 339 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 SNX17Q15036 470 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 CSPP1Q1MSJ5 1256 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 MTERF2Q49AM1 385 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 CDK5RAP3Q96JB5 506 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 NACC1Q96RE7 527 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 GOLPH3LQ9H4A5 285 aa22.36■■□□□ 1.17
SHKBP1-222ENST00000600320 ANKEF1Q9NU02 776 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms