RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 B3GNT9Q6UX72 402 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 DTHD1Q6ZMT9 781 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 TRAPPC12Q8WVT3 735 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 DYDC2Q96IM9 177 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 LBHD1Q9BQE6 289 aaPredicted RBP22.55■■□□□ 1.2
IRF3-221ENST00000598808 RAB34Q9BZG1 259 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 FTOQ9C0B1 505 aaKnown RBP eCLIP22.55■■□□□ 1.2
IRF3-221ENST00000598808 HIPK3Q9H422 1215 aa22.55■■□□□ 1.2
IRF3-221ENST00000598808 TRIM43BA6NCK2 446 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 TREHO43280 583 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 HBP1O60381 514 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 PSMC5P62195 406 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 SPIRE1Q08AE8 756 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 CTTNQ14247 550 aaKnown RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 TPH2Q8IWU9 490 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 C4orf32Q8N8J7 132 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 ERMNQ8TAM6 284 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 TRIM43Q96BQ3 446 aaPredicted RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 EIF2AK1Q9BQI3 630 aaKnown RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 LXNQ9BS40 222 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 RGL1Q9NZL6 768 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 TUBE1Q9UJT0 475 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 KAT6AQ92794 2004 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 DKC1O60832 514 aaKnown RBP eCLIP22.54■■□□□ 1.29e-9■■■□□ 15.7
IRF3-221ENST00000598808 BMP15O95972 392 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 P4HBP07237 508 aaKnown RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 QARSP47897 775 aaKnown RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 ATP2C1P98194 919 aaPredicted RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 MDM2Q00987 491 aaPredicted RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 HIC1Q14526 733 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 CCDC155Q8N6L0 562 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 BBXQ8WY36 941 aaPredicted RBP22.54■■□□□ 1.2
IRF3-221ENST00000598808 NRBP2Q9NSY0 501 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 TBX21Q9UL17 535 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 CLIC4Q9Y696 253 aa22.54■■□□□ 1.2
IRF3-221ENST00000598808 VWA3AA6NCI4 1184 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 RRN3P2A6NIE6 340 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 ZNF862O60290 1169 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 TRAK2O60296 914 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 ATP4AP20648 1035 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 ZBTB10Q96DT7 871 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 CCDC43Q96MW1 224 aaKnown RBP22.53■■□□□ 1.2
IRF3-221ENST00000598808 ZNF396Q96N95 335 aaPredicted RBP22.53■■□□□ 1.2
IRF3-221ENST00000598808 LRWD1Q9UFC0 647 aa22.53■■□□□ 1.2
IRF3-221ENST00000598808 WDR81Q562E7 1941 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 CYP2C18P33260 490 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 BFSP2Q13515 415 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 MTERF2Q49AM1 385 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 RETREG2Q8NC44 543 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 MYH15Q9Y2K3 1946 aa22.52■■□□□ 1.2
IRF3-221ENST00000598808 TRIP12Q14669 1992 aaPredicted RBP22.51■■□□□ 1.19
IRF3-221ENST00000598808 TMEM150BA6NC51 233 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 PRPHP41219 470 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 FXR2P51116 673 aaKnown RBP eCLIP22.51■■□□□ 1.19
IRF3-221ENST00000598808 CCL23P55773 120 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 PTK7Q13308 1070 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 ZRSR1Q15695 479 aaKnown RBP22.51■■□□□ 1.19
IRF3-221ENST00000598808 ZNF484Q5JVG2 852 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 HAUS3Q68CZ6 603 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 BADQ92934 168 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 USP28Q96RU2 1077 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 NOC4LQ9BVI4 516 aaKnown RBP22.51■■□□□ 1.19
IRF3-221ENST00000598808 FAM49AQ9H0Q0 323 aaPredicted RBP22.51■■□□□ 1.19
IRF3-221ENST00000598808 ZSWIM4Q9H7M6 989 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 UMODL1Q5DID0 1318 aa22.51■■□□□ 1.19
IRF3-221ENST00000598808 THPOP40225 353 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 CCT6AP40227 531 aaKnown RBP22.5■■□□□ 1.19
IRF3-221ENST00000598808 STK38Q15208 465 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 XKR3Q5GH77 459 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 PLA2G4FQ68DD2 849 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 SNX29Q8TEQ0 813 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 SH2D3AQ9BRG2 576 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 COLQQ9Y215 455 aaPredicted RBP22.5■■□□□ 1.19
IRF3-221ENST00000598808 COL1A2P08123 1366 aa22.5■■□□□ 1.19
IRF3-221ENST00000598808 TIMP1P01033 207 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 CTSHP09668 335 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 MARCKSP29966 332 aaPredicted RBP22.49■■□□□ 1.19
IRF3-221ENST00000598808 RUFY4Q6ZNE9 571 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 SERINC5Q86VE9 423 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 METTL13Q8N6R0 699 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 CAGE1Q8TC20 777 aa22.49■■□□□ 1.19
IRF3-221ENST00000598808 DHX38Q92620 1227 aaKnown RBP22.49■■□□□ 1.19
IRF3-221ENST00000598808 WRAP73Q9P2S5 460 aaPredicted RBP22.49■■□□□ 1.19
IRF3-221ENST00000598808 TFIP11Q9UBB9 837 aaKnown RBP22.49■■□□□ 1.19
IRF3-221ENST00000598808 PP2D1A8MPX8 630 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
IRF3-221ENST00000598808 ITGB8P26012 769 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 HOXC8P31273 242 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 YWHABP31946 246 aaKnown RBP22.48■■□□□ 1.19
IRF3-221ENST00000598808 MAGEA10P43363 369 aaPredicted RBP22.48■■□□□ 1.19
IRF3-221ENST00000598808 IL17AQ16552 155 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 ARL6IP4Q66PJ3 421 aaKnown RBP22.48■■□□□ 1.19
IRF3-221ENST00000598808 MTHFD1LQ6UB35 978 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 WNT8BQ93098 351 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 CTAGE1Q96RT6 745 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 LTBP2Q14767 1821 aa22.48■■□□□ 1.19
IRF3-221ENST00000598808 SLITRK3O94933 977 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms