RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PCDHA2Q9Y5H9 948 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 TDP2O95551 362 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 SFNP31947 248 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 JAK3P52333 1124 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 TAP1Q03518 808 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 MGAT3Q09327 533 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 NPY5RQ15761 445 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 ME3Q16798 604 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 INF2Q27J81 1249 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 ZNF484Q5JVG2 852 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 TRMT1LQ7Z2T5 733 aaKnown RBP16.53■□□□□ 0.24
XRCC1-208ENST00000598422 ARNTL2Q8WYA1 636 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 RAD9AQ99638 391 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 CERS4Q9HA82 394 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 DDX25Q9UHL0 483 aaKnown RBP16.53■□□□□ 0.24
XRCC1-208ENST00000598422 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 TRPV2Q9Y5S1 764 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 SCN5AQ14524 2016 aa16.53■□□□□ 0.24
XRCC1-208ENST00000598422 COL1A2P08123 1366 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 SMIM35A0A1B0GVV1 85 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 M0R2N6 131 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-208ENST00000598422 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 TRIM29Q14134 588 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 ADGRE1Q14246 886 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 LPIN1Q14693 890 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 Q4G0T1 1027 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 MOXD1Q6UVY6 613 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 MICALL1Q8N3F8 863 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 BBXQ8WY36 941 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-208ENST00000598422 PPM1EQ8WY54 764 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 SLC5A5Q92911 643 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 DISC1Q9NRI5 854 aa16.52■□□□□ 0.24
XRCC1-208ENST00000598422 IGSF9BQ9UPX0 1349 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 DOCK5Q9H7D0 1870 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 DTNBO60941 627 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 LARGE1O95461 756 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 CYP3A7P24462 503 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 KLRC1P26715 233 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 KRT2P35908 639 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 TMEM62Q0P6H9 643 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 NME8Q8N427 588 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
XRCC1-208ENST00000598422 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 UNC45AQ9H3U1 944 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 INSL6Q9Y581 213 aa16.51■□□□□ 0.23
XRCC1-208ENST00000598422 MAFBQ9Y5Q3 323 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-208ENST00000598422 RBAK-RBAKDNI3L0D1 243 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 EDIL3O43854 480 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 MARCH6O60337 910 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 ARHGEF15O94989 841 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 UPP2O95045 317 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
XRCC1-208ENST00000598422 FOSBP53539 338 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 PRKCEQ02156 737 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
XRCC1-208ENST00000598422 MIER3Q7Z3K6 550 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 METTL13Q8N6R0 699 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 RDM1Q8NG50 284 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 GJA10Q969M2 543 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 CDH23Q9H251 3354 aa16.5■□□□□ 0.23
XRCC1-208ENST00000598422 OATP04181 439 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 PAK2Q13177 524 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 C8orf34Q49A92 452 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
XRCC1-208ENST00000598422 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 OXER1Q8TDS5 423 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 MBOAT7Q96N66 472 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
XRCC1-208ENST00000598422 CELF4Q9BZC1 486 aaKnown RBP16.49■□□□□ 0.23
XRCC1-208ENST00000598422 NRBP2Q9NSY0 501 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 SQORQ9Y6N5 450 aa16.49■□□□□ 0.23
XRCC1-208ENST00000598422 COL6A3P12111 3177 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 LINC01553A4QN01 128 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 RFXAPO00287 272 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 MAGEB2O15479 319 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 SLC37A4O43826 429 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 CCNT1O60563 726 aaKnown RBP16.48■□□□□ 0.23
XRCC1-208ENST00000598422 JAK2O60674 1132 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 PSMD10O75832 226 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 C22orf31O95567 290 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
XRCC1-208ENST00000598422 ATP4AP20648 1035 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 CD52P31358 61 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms