RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TBCAO75347 108 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 DNAJC7Q99615 494 aa18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 MRPL44Q9H9J2 332 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 LUC7L2Q9Y383 392 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 OTOFQ9HC10 1997 aa18.84■□□□□ 0.61
SHKBP1-216ENST00000598201 A0A0U1RQJ8 604 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 KIF20AO95235 890 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 ETF1P62495 437 aaKnown RBP18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 TREML2Q5T2D2 321 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 RGMBQ6NW40 437 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 ATRIPQ8WXE1 791 aa18.83■□□□□ 0.61
SHKBP1-216ENST00000598201 ATP2A1O14983 1001 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 ZNF157P51786 506 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 TMTC1Q8IUR5 882 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 ZC3H3Q8IXZ2 948 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 OR8K1Q8NGG5 319 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 CEP63Q96MT8 703 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 CHP1Q99653 195 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 TEX13BQ9BXU2 312 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 SIK3Q9Y2K2 1263 aa18.83■□□□□ 0.6
SHKBP1-216ENST00000598201 PEX10O60683 326 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 KCNA1Q09470 495 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 KNOP1Q1ED39 458 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 WDR59Q6PJI9 974 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 CYP26C1Q6V0L0 522 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 ERO1BQ86YB8 467 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 PCMTD1Q96MG8 357 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
SHKBP1-216ENST00000598201 TESPA1A2RU30 521 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 SPDYE5A6NIY4 337 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 DYNC1I1O14576 645 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 FAM13AO94988 1023 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 CCDC175P0C221 793 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 HSPA6P17066 643 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 HTRA3P83110 453 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 PLS1Q14651 629 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 DEFB115Q30KQ5 88 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 EDRF1Q3B7T1 1238 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 CCDC40Q4G0X9 1142 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 VSIG10LQ86VR7 867 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 CCDC155Q8N6L0 562 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 NEK9Q8TD19 979 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 OPTNQ96CV9 577 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 NUP58Q9BVL2 599 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 OLFML3Q9NRN5 406 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 EPHB6O15197 1021 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 GCNT3O95395 438 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 NR3C2P08235 984 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 GAP43P17677 238 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 NMT1P30419 496 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 PPATQ06203 517 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 ADAM9Q13443 819 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 BMT2Q1RMZ1 405 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 MYCT1Q8N699 235 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 ACRBPQ8NEB7 543 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 OTUD5Q96G74 571 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 A1CFQ9NQ94 594 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 TBC1D22BQ9NU19 505 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 CYP39A1Q9NYL5 469 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 DNAI1Q9UI46 699 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 TRAF3IP3Q9Y228 551 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 SAMM50Q9Y512 469 aa18.81■□□□□ 0.6
SHKBP1-216ENST00000598201 CCNE2O96020 404 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 FIZ1Q96SL8 496 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 IKZF4Q9H2S9 585 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 ZSWIM4Q9H7M6 989 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 MYPNQ86TC9 1320 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 NR2F2P24468 414 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 CCND2P30279 289 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 ZNF131P52739 623 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 MARSP56192 900 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 UGCGQ16739 394 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 FIGNQ5HY92 759 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 PAXIP1Q6ZW49 1069 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 TRIM59Q8IWR1 403 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 ACAD9Q9H845 621 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 PARVGQ9HBI0 331 aa18.8■□□□□ 0.6
SHKBP1-216ENST00000598201 ASTN1O14525 1302 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 PTPRFP10586 1907 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 ARHGEF35A5YM69 484 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 GOLGA6L9A6NEM1 432 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 RGS20O76081 388 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 TUBB4AP04350 444 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 ZBED6P86452 979 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 ZC2HC1CQ53FD0 456 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 DAW1Q8N136 415 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 SMCR8Q8TEV9 937 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 FAM207AQ9NSI2 230 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-216ENST00000598201 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms