RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 UGCGQ16739 394 aa25.74■■□□□ 1.71
IRF3-220ENST00000598108 Q7L0L9 218 aa25.74■■□□□ 1.71
IRF3-220ENST00000598108 TRMT1LQ7Z2T5 733 aaKnown RBP25.74■■□□□ 1.71
IRF3-220ENST00000598108 POTEDQ86YR6 584 aa25.74■■□□□ 1.71
IRF3-220ENST00000598108 FAM20AQ96MK3 541 aa25.74■■□□□ 1.71
IRF3-220ENST00000598108 ZBBXA8MT70 800 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 CAND2O75155 1236 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 TAF2Q6P1X5 1199 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 MIER3Q7Z3K6 550 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 RPAINQ86UA6 219 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 CKAP2LQ8IYA6 745 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 DNAJB3Q8WWF6 145 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 TNPO1Q92973 898 aaKnown RBP25.73■■□□□ 1.71
IRF3-220ENST00000598108 NAP1L4Q99733 375 aaKnown RBP25.73■■□□□ 1.71
IRF3-220ENST00000598108 VAV3Q9UKW4 847 aa25.73■■□□□ 1.71
IRF3-220ENST00000598108 IGSF9BQ9UPX0 1349 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 EML1O00423 815 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 CHRNA1P02708 482 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 SFNP31947 248 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 JAK3P52333 1124 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 FAM26DQ5JW98 314 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 MTIF3Q9H2K0 278 aaKnown RBP25.72■■□□□ 1.71
IRF3-220ENST00000598108 PCDHA2Q9Y5H9 948 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 SLC4A7Q9Y6M7 1214 aa25.72■■□□□ 1.71
IRF3-220ENST00000598108 SCN5AQ14524 2016 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 TBX3O15119 743 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 ACTN1P12814 892 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 KLRC1P26715 233 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 MTHFD1LQ6UB35 978 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 RDM1Q8NG50 284 aa25.71■■□□□ 1.71
IRF3-220ENST00000598108 BBXQ8WY36 941 aaPredicted RBP25.71■■□□□ 1.71
IRF3-220ENST00000598108 FAM49AQ9H0Q0 323 aaPredicted RBP25.71■■□□□ 1.71
IRF3-220ENST00000598108 FOXP1Q9H334 677 aaPredicted RBP25.71■■□□□ 1.71
IRF3-220ENST00000598108 ATP2B1P20020 1258 aa25.7■■□□□ 1.7
IRF3-220ENST00000598108 PBX2P40425 430 aa25.7■■□□□ 1.7
IRF3-220ENST00000598108 ZNF484Q5JVG2 852 aa25.7■■□□□ 1.7
IRF3-220ENST00000598108 DEFB123Q8N688 67 aa25.7■■□□□ 1.7
IRF3-220ENST00000598108 TET1Q8NFU7 2136 aa25.7■■□□□ 1.7
IRF3-220ENST00000598108 KIF28PB7ZC32 967 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 MGAT3Q09327 533 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 PPP2R5CQ13362 524 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 CNKSR3Q6P9H4 555 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 DBF4BQ8NFT6 615 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 PBX4Q9BYU1 374 aa25.69■■□□□ 1.7
IRF3-220ENST00000598108 MARCH6O60337 910 aa25.68■■□□□ 1.7
IRF3-220ENST00000598108 STBD1O95210 358 aa25.68■■□□□ 1.7
IRF3-220ENST00000598108 RABGGTBP53611 331 aa25.68■■□□□ 1.7
IRF3-220ENST00000598108 PRKCEQ02156 737 aa25.68■■□□□ 1.7
IRF3-220ENST00000598108 RSPH3Q86UC2 560 aa25.68■■□□□ 1.7
IRF3-220ENST00000598108 OATP04181 439 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 ATP2A2P16615 1042 aaKnown RBP25.67■■□□□ 1.7
IRF3-220ENST00000598108 DNAJB2P25686 324 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 GJB2P29033 226 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 SPIRE1Q08AE8 756 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 PLEKHG4Q58EX7 1191 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 KIAA0319LQ8IZA0 1049 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 FAM167AQ96KS9 214 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 MTMR9Q96QG7 549 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 TMEM60Q9H2L4 133 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 NRBP2Q9NSY0 501 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 CDY2AQ9Y6F7 541 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 COL1A2P08123 1366 aa25.67■■□□□ 1.7
IRF3-220ENST00000598108 SMIM35A0A1B0GVV1 85 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 NEMFO60524 1076 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 BAIAP3O94812 1187 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 C22orf31O95567 290 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 MRPS6P82932 125 aaKnown RBP25.66■■□□□ 1.7
IRF3-220ENST00000598108 TMEM62Q0P6H9 643 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 CALCRLQ16602 461 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 NOSTRINQ8IVI9 506 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 SLFN12Q8IYM2 578 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 BANK1Q8NDB2 785 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 FAM161BQ96MY7 647 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 TTYH1Q9H313 450 aaPredicted RBP25.66■■□□□ 1.7
IRF3-220ENST00000598108 MTMR10Q9NXD2 777 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 TANC1Q9C0D5 1861 aa25.66■■□□□ 1.7
IRF3-220ENST00000598108 ABHD14A-ACY1A0A1B0GW23 586 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 TMEM150BA6NC51 233 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 BAG4O95429 457 aaKnown RBP25.65■■□□□ 1.7
IRF3-220ENST00000598108 GHRP10912 638 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 U2AF2P26368 475 aaKnown RBP eCLIP25.65■■□□□ 1.7
IRF3-220ENST00000598108 MCM7P33993 719 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 WDR5P61964 334 aaKnown RBP25.65■■□□□ 1.7
IRF3-220ENST00000598108 IKBKEQ14164 716 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 SEMA6BQ9H3T3 888 aa25.65■■□□□ 1.7
IRF3-220ENST00000598108 YBX2Q9Y2T7 364 aaKnown RBP25.65■■□□□ 1.7
IRF3-220ENST00000598108 MYOGP15173 224 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 DEFB103AP81534 67 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 MKRN4PQ13434 485 aaPredicted RBP25.64■■□□□ 1.7
IRF3-220ENST00000598108 CUL4AQ13619 759 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 LPIN1Q14693 890 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 ZNF174Q15697 407 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 TMCO2Q7Z6W1 182 aaPredicted RBP25.64■■□□□ 1.7
IRF3-220ENST00000598108 TIFAQ96CG3 184 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 WRAP73Q9P2S5 460 aaPredicted RBP25.64■■□□□ 1.7
IRF3-220ENST00000598108 SMC3Q9UQE7 1217 aa25.64■■□□□ 1.7
IRF3-220ENST00000598108 TXKP42681 527 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 PSMC5P62195 406 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 GNL2Q13823 731 aaKnown RBP25.63■■□□□ 1.69
IRF3-220ENST00000598108 EPHA7Q15375 998 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms