RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 TUBBP07437 444 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 BMP3P12645 472 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 ITGA4P13612 1032 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 PRPHP41219 470 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 AMPD2Q01433 879 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 MTM1Q13496 603 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 CREG2Q8IUH2 290 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 ACER1Q8TDN7 264 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 HAS1Q92839 578 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-207ENST00000597928 RUSC1Q9BVN2 902 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 OSGEPQ9NPF4 335 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-207ENST00000597928 VIMP08670 466 aaKnown RBP13.53□□□□□ -0.24
USHBP1-207ENST00000597928 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 CYP11B2P19099 503 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
USHBP1-207ENST00000597928 EPHB4P54760 987 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 CCDC38Q502W7 563 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-207ENST00000597928 FAM102BQ5T8I3 360 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 LMBRD2Q68DH5 695 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-207ENST00000597928 SRLQ86TD4 932 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 ABCB11O95342 1321 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 PVALEFA0A1B0GWK0 134 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 MAP2K7O14733 419 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 NDUFB10O96000 172 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 PPP1R2P41236 205 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 TTI1O43156 1089 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 NF2P35240 595 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 RPGRIP1Q96KN7 1286 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 ZNF577Q9BSK1 485 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
USHBP1-207ENST00000597928 SYF2O95926 243 aaKnown RBP13.52□□□□□ -0.24
USHBP1-207ENST00000597928 MYL1P05976 194 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 UCHL3P15374 230 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 CEP72Q9P209 647 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 MYH8P13535 1937 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.24
USHBP1-207ENST00000597928 AKAP3O75969 853 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 IRAK1P51617 712 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 PPP1R7Q15435 360 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
USHBP1-207ENST00000597928 PRAMEF18Q5VWM3 479 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 AADACL2Q6P093 401 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 LARGE2Q8N3Y3 721 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 GLG1Q92896 1179 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 BTBD6Q96KE9 485 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 EIF2AK1Q9BQI3 630 aaKnown RBP13.52□□□□□ -0.25
USHBP1-207ENST00000597928 ABCC6O95255 1503 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 TUBB4BP68371 445 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 KLHDC7AQ5VTJ3 777 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 RAB21Q9UL25 225 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 UTP11Q9Y3A2 253 aaKnown RBP13.52□□□□□ -0.25
USHBP1-207ENST00000597928 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
USHBP1-207ENST00000597928 RDXP35241 583 aaKnown RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 PPP4CP60510 307 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 DDR1Q08345 913 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 CETN1Q12798 172 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 BIRC3Q13489 604 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 IFI16Q16666 785 aaKnown RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 PAPD7Q5XG87 772 aaKnown RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 ZNF571Q7Z3V5 609 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 KIFC3Q9BVG8 833 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 PI4KBQ9UBF8 816 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 MYH10P35580 1976 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 FAM86B1E9PN63 330 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 H0YIN7 160 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 FAM86B2P0C5J1 330 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 SHMT1P34896 483 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 MAP2K1Q02750 393 aaPredicted RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 DGKZQ13574 1117 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 TCHPQ9BT92 498 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 CD2APQ9Y5K6 639 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 DCCP43146 1447 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
USHBP1-207ENST00000597928 NEFHP12036 1026 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 NR1D1P20393 614 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 KCNJ1P48048 391 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 MIER3Q7Z3K6 550 aa13.51□□□□□ -0.25
USHBP1-207ENST00000597928 MDM1Q8TC05 714 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms