RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 AK8Q96MA6 479 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 HSD17B14Q9BPX1 270 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 POLR3CQ9BUI4 534 aaPredicted RBP16.1■□□□□ 0.17
VRK3-213ENST00000597215 ZSWIM4Q9H7M6 989 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 TUFT1Q9NNX1 390 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 NRBP2Q9NSY0 501 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
VRK3-213ENST00000597215 RRN3P2A6NIE6 340 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 SPTLC2O15270 562 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 EVI5O60447 810 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 INSRRP14616 1297 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 RPA1P27694 616 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 HOXC8P31273 242 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 GRIK4Q16099 956 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 XKR3Q5GH77 459 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 TPH2Q8IWU9 490 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 C4orf19Q8IY42 314 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 KCNG4Q8TDN1 519 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 SNX29Q8TEQ0 813 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 DPF3Q92784 378 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
VRK3-213ENST00000597215 COL1A2P08123 1366 aa16.09■□□□□ 0.17
VRK3-213ENST00000597215 TRIP12Q14669 1992 aaPredicted RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 B4GALT4O60513 344 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 PPP6R2O75170 966 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 SLITRK3O94933 977 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 CD4P01730 458 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 MUTP22033 750 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 PTGISQ16647 500 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 SETD4Q9NVD3 440 aa16.08■□□□□ 0.16
VRK3-213ENST00000597215 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
VRK3-213ENST00000597215 TCHHQ07283 1943 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 DDX11L8A8MPP1 907 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 PP2D1A8MPX8 630 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 MED24O75448 989 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 LYPLA2O95372 231 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 CLTBP09497 229 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 IGBP1P78318 339 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 FAAP100Q0VG06 881 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 OTUD6AQ7L8S5 288 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 KDM3AQ9Y4C1 1321 aa16.07■□□□□ 0.16
VRK3-213ENST00000597215 TREHO43280 583 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 SLC26A4O43511 780 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 STBD1O95210 358 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 CDC25AP30304 524 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 YWHABP31946 246 aaKnown RBP16.06■□□□□ 0.16
VRK3-213ENST00000597215 ADAM17P78536 824 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 ZNF200P98182 395 aaPredicted RBP16.06■□□□□ 0.16
VRK3-213ENST00000597215 GRIN1Q05586 938 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 PTK7Q13308 1070 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 HIC1Q14526 733 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 CABP7Q86V35 215 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 TRAPPC12Q8WVT3 735 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
VRK3-213ENST00000597215 NIFKQ9BYG3 293 aaKnown RBP16.06■□□□□ 0.16
VRK3-213ENST00000597215 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
VRK3-213ENST00000597215 CSRNP2Q9H175 543 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 TMEM39AQ9NV64 488 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 RCOR1Q9UKL0 485 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 NR2E3Q9Y5X4 410 aa16.06■□□□□ 0.16
VRK3-213ENST00000597215 MBLAC1A4D2B0 266 aaPredicted RBP16.05■□□□□ 0.16
VRK3-213ENST00000597215 ZBTB42B2RXF5 422 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
VRK3-213ENST00000597215 UBA7P41226 1012 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 ME1P48163 572 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 MLLT1Q03111 559 aaPredicted RBP16.05■□□□□ 0.16
VRK3-213ENST00000597215 TARBP2Q15633 366 aaKnown RBP16.05■□□□□ 0.16
VRK3-213ENST00000597215 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 ANO5Q75V66 913 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 SERINC5Q86VE9 423 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 CCDC155Q8N6L0 562 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
VRK3-213ENST00000597215 CDK5RAP3Q96JB5 506 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 SPATA32Q96LK8 384 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
VRK3-213ENST00000597215 CLIC6Q96NY7 704 aa16.05■□□□□ 0.16
VRK3-213ENST00000597215 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms