RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MYL1P05976 194 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 PSAPP07602 524 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 HOXC6P09630 235 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 TXNP10599 105 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 MCM6Q14566 821 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 MIS18BP1Q6P0N0 1132 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 SCFD2Q8WU76 684 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 LARP4BQ92615 738 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 USP6NLQ92738 828 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 CCDC47Q96A33 483 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 NACC1Q96RE7 527 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 KBTBD4Q9NVX7 518 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 GJD2Q9UKL4 321 aa14.58□□□□□ -0.08
SHKBP1-209ENST00000595803 A0A087WWV3 80 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 GGPS1O95749 300 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 CCNE2O96020 404 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 PLA2G4BP0C869 781 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 QARSP47897 775 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 SP4Q02446 784 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 TYRO3Q06418 890 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 DHX37Q8IY37 1157 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 C7orf25Q9BPX7 421 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 BLZF1Q9H2G9 400 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 ABHD16BQ9H3Z7 469 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 BCAS3Q9H6U6 928 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 ZSWIM4Q9H7M6 989 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 PDGFCQ9NRA1 345 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 ANO10Q9NW15 660 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 TUBE1Q9UJT0 475 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 SYNGAP1Q96PV0 1343 aa14.57□□□□□ -0.08
SHKBP1-209ENST00000595803 RBM47A0AV96 593 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 BIN1O00499 593 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 EYA4O95677 639 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 UBA1P22314 1058 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 SARSP49591 514 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 NLRP12P59046 1061 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 ACTR2P61160 394 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 PSMC5P62195 406 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 DPYDQ12882 1025 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 CUL4BQ13620 913 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 ACVR2BQ13705 512 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 TJAP1Q5JTD0 557 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 CELF3Q5SZQ8 465 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 ISM2Q6H9L7 571 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 TAPT1Q6NXT6 567 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 BANK1Q8NDB2 785 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 LRRC15Q8TF66 581 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 MYLIPQ8WY64 445 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 SEPT1Q8WYJ6 367 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 GSDMAQ96QA5 445 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 MTRQ99707 1265 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 APBA2Q99767 749 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 FUCA2Q9BTY2 467 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 PLXNA1Q9UIW2 1896 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 KIAA1217Q5T5P2 1943 aa14.56□□□□□ -0.08
SHKBP1-209ENST00000595803 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 ARIH2O95376 493 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 KRT18P05783 430 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 XRCC6P12956 609 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 CASP1P29466 404 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 PSMC6P62333 389 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 STX1AQ16623 288 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 SWSAP1Q6NVH7 229 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 METTL7BQ6UX53 244 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 ABHD15Q6UXT9 468 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 SYT2Q8N9I0 419 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 TRIML1Q8N9V2 468 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 ATP6V0A1Q93050 837 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 LXNQ9BS40 222 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 GABBR1Q9UBS5 961 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 MAN1B1Q9UKM7 699 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 ZHX1Q9UKY1 873 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 DNAH12Q6ZR08 3092 aa14.55□□□□□ -0.08
SHKBP1-209ENST00000595803 MYMKA6NI61 221 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 NOP56O00567 594 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 BACH1O14867 736 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 ATG7O95352 703 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 LYPLA2O95372 231 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 GH1P01241 217 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 SUPT20HL2P0C7V6 817 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 XRCC5P13010 732 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 FOSL2P15408 326 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 ASIC1P78348 528 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 LAMC2Q13753 1193 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms