RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 RDM1Q8NG50 284 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 VWCEQ96DN2 955 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 POTEMA6NI47 508 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 ZBTB42B2RXF5 422 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 OATP04181 439 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 CTSHP09668 335 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 IQCF3P0C7M6 154 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 GNAT1P11488 350 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 THPOP40225 353 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 TRAPPC10P48553 1259 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 SLC26A2P50443 739 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 BFSP2Q13515 415 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 ZNF618Q5T7W0 954 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 TRAF7Q6Q0C0 670 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 C16orf59Q7L2K0 433 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 TMEM199Q8N511 208 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 C4orf32Q8N8J7 132 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 RETREG2Q8NC44 543 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 CAGE1Q8TC20 777 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 WRAP73Q9P2S5 460 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 PCDHA12Q9UN75 941 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
SHKBP1-207ENST00000595631 MBLAC1A4D2B0 266 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 HBP1O60381 514 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 STBD1O95210 358 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 OR52Z1P0C646 297 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 SELPP16109 830 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 RBL2Q08999 1139 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 PPIGQ13427 754 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 SHHQ15465 462 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 LRRC8DQ7L1W4 858 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 BBXQ8WY36 941 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 DYDC2Q96IM9 177 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 OSBPL7Q9BZF2 842 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 FAM49AQ9H0Q0 323 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 MTMR6Q9Y217 621 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 TRIOBPQ9H2D6 2365 aa15.5■□□□□ 0.07
SHKBP1-207ENST00000595631 COL1A2P08123 1366 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 RRN3P2A6NIE6 340 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 HSP90AA1P07900 732 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 PDCP20941 246 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 TECP42680 631 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 CYP4A11Q02928 519 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 PTGDRQ13258 359 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 CTTNQ14247 550 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 MBTPS1Q14703 1052 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 GPNMBQ14956 572 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 EPHA7Q15375 998 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 FAM173BQ6P4H8 233 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 TDHQ8IZJ6 230 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 IL23AQ9NPF7 189 aa15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 SEPT9Q9UHD8 586 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-207ENST00000595631 KLRC1P26715 233 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 PSMC5P62195 406 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 RESTQ13127 1097 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 IL17AQ16552 155 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 RILPL1Q5EBL4 403 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 ZNF484Q5JVG2 852 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 TMEM240Q5SV17 173 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 PLA2G4FQ68DD2 849 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 ZNF365Q70YC5 407 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 FAM167AQ96KS9 214 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 LXNQ9BS40 222 aa15.48■□□□□ 0.07
SHKBP1-207ENST00000595631 A0A087WWV3 80 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 ZBTB39O15060 712 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 STX6O43752 255 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 NBNO60934 754 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 C22orf31O95567 290 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 P4HBP07237 508 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 QARSP47897 775 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 TCTN1Q2MV58 587 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 MTERF2Q49AM1 385 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 HABP4Q5JVS0 413 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 FOXD4L5Q5VV16 416 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 ANO5Q75V66 913 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 FOXD4L4Q8WXT5 416 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 FTOQ9C0B1 505 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 PCDHA2Q9Y5H9 948 aa15.47■□□□□ 0.07
SHKBP1-207ENST00000595631 RSPH10B2B2RC85 870 aa15.46■□□□□ 0.07
SHKBP1-207ENST00000595631 SLITRK3O94933 977 aa15.46■□□□□ 0.07
SHKBP1-207ENST00000595631 CHRNA1P02708 482 aa15.46■□□□□ 0.07
SHKBP1-207ENST00000595631 RSPH10BP0C881 870 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms