RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 CYP2C18P33260 490 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 QARSP47897 775 aaKnown RBP25.7■■□□□ 1.7
PNKP-205ENST00000595081 PSMC5P62195 406 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 MDM2Q00987 491 aaPredicted RBP25.7■■□□□ 1.7
PNKP-205ENST00000595081 CTTNQ14247 550 aaKnown RBP25.7■■□□□ 1.7
PNKP-205ENST00000595081 SF3A1Q15459 793 aaKnown RBP25.7■■□□□ 1.7
PNKP-205ENST00000595081 TMEM266Q2M3C6 531 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 SERINC5Q86VE9 423 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 BBXQ8WY36 941 aaPredicted RBP25.7■■□□□ 1.7
PNKP-205ENST00000595081 FAM167AQ96KS9 214 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 LXNQ9BS40 222 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 CLIC4Q9Y696 253 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 WDR81Q562E7 1941 aa25.7■■□□□ 1.7
PNKP-205ENST00000595081 TMEM150BA6NC51 233 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 ZBTB42B2RXF5 422 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 STBD1O95210 358 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 F13A1P00488 732 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 TIMP1P01033 207 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 PRPHP41219 470 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 FXR2P51116 673 aaKnown RBP eCLIP25.69■■□□□ 1.7
PNKP-205ENST00000595081 PTK7Q13308 1070 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 BADQ92934 168 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 TNPO1Q92973 898 aaKnown RBP25.69■■□□□ 1.7
PNKP-205ENST00000595081 TUBE1Q9UJT0 475 aa25.69■■□□□ 1.7
PNKP-205ENST00000595081 RRN3P2A6NIE6 340 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 MAGEA10P43363 369 aaPredicted RBP25.68■■□□□ 1.7
PNKP-205ENST00000595081 CEBPZQ03701 1054 aaKnown RBP25.68■■□□□ 1.7
PNKP-205ENST00000595081 ZNF484Q5JVG2 852 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 DTHD1Q6ZMT9 781 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 RUFY4Q6ZNE9 571 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 TPH2Q8IWU9 490 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 HSD17B14Q9BPX1 270 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 WNT8AQ9H1J5 351 aa25.68■■□□□ 1.7
PNKP-205ENST00000595081 SEPT9Q9UHD8 586 aaPredicted RBP25.68■■□□□ 1.7
PNKP-205ENST00000595081 LTBP2Q14767 1821 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 MBLAC1A4D2B0 266 aaPredicted RBP25.67■■□□□ 1.7
PNKP-205ENST00000595081 SLITRK3O94933 977 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 CCL23P55773 120 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 TRIM71Q2Q1W2 868 aaKnown RBP25.67■■□□□ 1.7
PNKP-205ENST00000595081 FOXD4L6Q3SYB3 417 aaPredicted RBP25.67■■□□□ 1.7
PNKP-205ENST00000595081 XKR3Q5GH77 459 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 FOXD4L3Q6VB84 417 aaPredicted RBP25.67■■□□□ 1.7
PNKP-205ENST00000595081 USP28Q96RU2 1077 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 LBHD1Q9BQE6 289 aaPredicted RBP25.67■■□□□ 1.7
PNKP-205ENST00000595081 NRBP2Q9NSY0 501 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 COL1A2P08123 1366 aa25.67■■□□□ 1.7
PNKP-205ENST00000595081 KAT6AQ92794 2004 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 DDX11L8A8MPP1 907 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 BMP15O95972 392 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 ANP32AP39687 249 aaKnown RBP25.66■■□□□ 1.7
PNKP-205ENST00000595081 BFSP2Q13515 415 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 IGSF22Q8N9C0 903 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 SH2D3AQ9BRG2 576 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 ZSWIM4Q9H7M6 989 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 LRWD1Q9UFC0 647 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 CEP131Q9UPN4 1083 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 ZDHHC9Q9Y397 364 aa25.66■■□□□ 1.7
PNKP-205ENST00000595081 VWA3AA6NCI4 1184 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 PP2D1A8MPX8 630 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 DKC1O60832 514 aaKnown RBP eCLIP25.65■■□□□ 1.7
PNKP-205ENST00000595081 MED24O75448 989 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 BRD1O95696 1058 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 KLRC1P26715 233 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 PTPAQ15257 358 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 PRPF38BQ5VTL8 546 aaKnown RBP25.65■■□□□ 1.7
PNKP-205ENST00000595081 PLA2G4FQ68DD2 849 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 MFSD5Q6N075 450 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 MTHFD1LQ6UB35 978 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 ANO5Q75V66 913 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 C4orf19Q8IY42 314 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 CCDC155Q8N6L0 562 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 CAGE1Q8TC20 777 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 NEK9Q8TD19 979 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 SCLYQ96I15 445 aa25.65■■□□□ 1.7
PNKP-205ENST00000595081 DAXXQ9UER7 740 aaPredicted RBP25.65■■□□□ 1.7
PNKP-205ENST00000595081 RBAK-RBAKDNI3L0D1 243 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 PITPNM1O00562 1244 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 ZBTB39O15060 712 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 SPATA31C1P0DKV0 1188 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 CKBP12277 381 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 THPOP40225 353 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 PDIA5Q14554 519 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 MTERF2Q49AM1 385 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 ARL6IP4Q66PJ3 421 aaKnown RBP25.64■■□□□ 1.7
PNKP-205ENST00000595081 RETREG2Q8NC44 543 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 ERMNQ8TAM6 284 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 NIFKQ9BYG3 293 aaKnown RBP25.64■■□□□ 1.7
PNKP-205ENST00000595081 RAB34Q9BZG1 259 aa25.64■■□□□ 1.7
PNKP-205ENST00000595081 FAM49AQ9H0Q0 323 aaPredicted RBP25.64■■□□□ 1.7
PNKP-205ENST00000595081 C22orf31O95567 290 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 CDC25AP30304 524 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 YWHABP31946 246 aaKnown RBP25.63■■□□□ 1.69
PNKP-205ENST00000595081 RBL2Q08999 1139 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 TARBP2Q15633 366 aaKnown RBP25.63■■□□□ 1.69
PNKP-205ENST00000595081 TAF2Q6P1X5 1199 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 CATSPER3Q86XQ3 398 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 DNAJB3Q8WWF6 145 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 GDF15Q99988 308 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 TUFT1Q9NNX1 390 aa25.63■■□□□ 1.69
PNKP-205ENST00000595081 TFIP11Q9UBB9 837 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms