RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ATP9AO75110 1047 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 LYPLA2O95372 231 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 GCNT3O95395 438 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 SYCP1Q15431 976 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 KNOP1Q1ED39 458 aaKnown RBP13.19□□□□□ -0.3
NPC1-214ENST00000593280 RIOX2Q8IUF8 465 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 ZC3H3Q8IXZ2 948 aaKnown RBP13.19□□□□□ -0.3
NPC1-214ENST00000593280 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 RDM1Q8NG50 284 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
NPC1-214ENST00000593280 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 NDST4Q9H3R1 872 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 BTBD7Q9P203 1132 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
NPC1-214ENST00000593280 KCNH4Q9UQ05 1017 aa13.19□□□□□ -0.3
NPC1-214ENST00000593280 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 UBE4BO95155 1302 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 EIF3DO15371 548 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPC1-214ENST00000593280 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
NPC1-214ENST00000593280 GRIN3BO60391 1043 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
NPC1-214ENST00000593280 FECHP22830 423 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 KRT9P35527 623 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 ZNF131P52739 623 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
NPC1-214ENST00000593280 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
NPC1-214ENST00000593280 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
NPC1-214ENST00000593280 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 AGTPBP1Q9UPW5 1226 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 TRAF3IP3Q9Y228 551 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
NPC1-214ENST00000593280 TTC26A0AVF1 554 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 PDXKO00764 312 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 CETN3O15182 167 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 CCNE2O96020 404 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 PSMC5P62195 406 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TOGARAM2Q6ZUX3 1019 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 IWS1Q96ST2 819 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 SENP7Q9BQF6 1050 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 POLD4Q9HCU8 107 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TYW1Q9NV66 732 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 NFASCO94856 1347 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 SFI1A8K8P3 1242 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 NKRFO15226 690 aaKnown RBP eCLIP13.17□□□□□ -0.3
NPC1-214ENST00000593280 HIP1RO75146 1068 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TUBB4AP04350 444 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 KCNA2P16389 499 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 NR2F2P24468 414 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 YWHABP31946 246 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 HOXD13P35453 343 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 MARSP56192 900 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 HERVK_113P62684 666 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 ADAM9Q13443 819 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 UGCGQ16739 394 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 CYP26C1Q6V0L0 522 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 NCAPG2Q86XI2 1143 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 TMTC1Q8IUR5 882 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 FAM178BQ8IXR5 827 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
NPC1-214ENST00000593280 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
NPC1-214ENST00000593280 ASTN1O14525 1302 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 PEX10O60683 326 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 RGS20O76081 388 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 UQCRHP07919 91 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 CCDC175P0C221 793 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 NMT1P30419 496 aaKnown RBP13.16□□□□□ -0.3
NPC1-214ENST00000593280 RARRES1P49788 294 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 KLK7P49862 253 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 MTF1Q14872 753 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 STXBP2Q15833 593 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 FIGNQ5HY92 759 aa13.16□□□□□ -0.3
NPC1-214ENST00000593280 ODR4Q5SWX8 454 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms