RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 FAM83GA6ND36 823 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 FFAR3O14843 346 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 F2P00734 622 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 PTGS1P23219 599 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 CNGA1P29973 690 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 SOX5P35711 763 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 MASP1P48740 699 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 SARSP49591 514 aaKnown RBP6.87□□□□□ -1.31
SMAD4-216ENST00000593223 CAP1Q01518 475 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 UBR7Q8N806 425 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 WDR48Q8TAF3 677 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 CHAC2Q8WUX2 184 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 ORAI3Q9BRQ5 295 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 ACSS2Q9NR19 701 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 THG1LQ9NWX6 298 aaKnown RBP6.87□□□□□ -1.31
SMAD4-216ENST00000593223 UCKL1Q9NWZ5 548 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
SMAD4-216ENST00000593223 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMAD4-216ENST00000593223 ATP2A2P16615 1042 aaKnown RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 SLC9A1P19634 815 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 RPL13P26373 211 aaKnown RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 AOAHP28039 575 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 IL2P60568 153 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 SEPT7Q16181 437 aaKnown RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 CC2D1AQ6P1N0 951 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 TRMT10BQ6PF06 316 aaKnown RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 DDX46Q7L014 1031 aaKnown RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 ASB15Q8WXK1 588 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-216ENST00000593223 CAAP1Q9H8G2 361 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 L2HGDHQ9H9P8 463 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 OXSMQ9NWU1 459 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
SMAD4-216ENST00000593223 PRAMEF22A3QJZ6 481 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 SH3D21A4FU49 640 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMAD4-216ENST00000593223 SDHAP31040 664 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 MC4RP32245 332 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 KPNA1P52294 538 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-216ENST00000593223 OCRLQ01968 901 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 DLX2Q07687 328 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-216ENST00000593223 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-216ENST00000593223 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 CARFQ8N187 725 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 STPG3Q8N7X2 389 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 CHTF18Q8WVB6 975 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 USP7Q93009 1102 aa6.85□□□□□ -1.31
SMAD4-216ENST00000593223 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
SMAD4-216ENST00000593223 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 ERCC6L2Q5T890 1561 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 DVL2O14641 736 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 CYP1A1P04798 512 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-216ENST00000593223 CYP17A1P05093 508 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 BMP7P18075 431 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 IL13P35225 146 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 STAT3P40763 770 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 DSG1Q02413 1049 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 RTP5Q14D33 572 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
SMAD4-216ENST00000593223 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 DPP8Q6V1X1 898 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-216ENST00000593223 RNF180Q86T96 592 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 C11orf74Q86VG3 221 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 TP53I13Q8NBR0 393 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-216ENST00000593223 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 H2AFY2Q9P0M6 372 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-216ENST00000593223 BTBD7Q9P203 1132 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 FTSJ1Q9UET6 329 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 ASB1Q9Y576 335 aa6.84□□□□□ -1.31
SMAD4-216ENST00000593223 RASSF10A6NK89 507 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 KCNC1P48547 511 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SLURP1P55000 103 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 MLLT6P55198 1093 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-216ENST00000593223 STRN3Q13033 797 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 FILIP1Q7Z7B0 1213 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SP8Q8IXZ3 490 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 ELF4Q99607 663 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-216ENST00000593223 TMX1Q9H3N1 280 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SPC25Q9HBM1 224 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 GALNT8Q9NY28 637 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 SPO11Q9Y5K1 396 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 MRC2Q9UBG0 1479 aa6.83□□□□□ -1.32
SMAD4-216ENST00000593223 WDR62O43379 1518 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 DNAJC6O75061 913 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 SASH1O94885 1247 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 PTX3P26022 381 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-216ENST00000593223 FNTBP49356 437 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 JAG1P78504 1218 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
SMAD4-216ENST00000593223 WDR72Q3MJ13 1102 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms