RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 MBTPS1Q14703 1052 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 ZNF365Q70YC5 407 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 RPAINQ86UA6 219 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 SLFN12Q8IYM2 578 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 RETREG2Q8NC44 543 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 SCN5AQ14524 2016 aa17.26■□□□□ 0.35
TRIM47-206ENST00000592942 NEMFO60524 1076 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 NBNO60934 754 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 IGBP1P78318 339 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 CALCRLQ16602 461 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 TTC38Q5R3I4 469 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 TET1Q8NFU7 2136 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 BBXQ8WY36 941 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-206ENST00000592942 WRAP73Q9P2S5 460 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-206ENST00000592942 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 TRPC6Q9Y210 931 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 PCDHB6Q9Y5E3 794 aa17.25■□□□□ 0.35
TRIM47-206ENST00000592942 MYH9P35579 1960 aaKnown RBP17.25■□□□□ 0.35
TRIM47-206ENST00000592942 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
TRIM47-206ENST00000592942 BAG4O95429 457 aaKnown RBP17.24■□□□□ 0.35
TRIM47-206ENST00000592942 THPOP40225 353 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 EPHA7Q15375 998 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 ZNF484Q5JVG2 852 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 MTHFD1LQ6UB35 978 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 TRMT1LQ7Z2T5 733 aaKnown RBP17.24■□□□□ 0.35
TRIM47-206ENST00000592942 CCDC155Q8N6L0 562 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
TRIM47-206ENST00000592942 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-206ENST00000592942 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 TUBE1Q9UJT0 475 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 PCDHA2Q9Y5H9 948 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 COL6A3P12111 3177 aa17.24■□□□□ 0.35
TRIM47-206ENST00000592942 H3BQV1 296 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 SLITRK3O94933 977 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 CHRNA1P02708 482 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 CXCL10P02778 98 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 SYT1P21579 422 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 KLRC1P26715 233 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 RFC2P35250 354 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 TXKP42681 527 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 ORC2Q13416 577 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 LRIT3Q3SXY7 679 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 RPUSD2Q8IZ73 545 aaKnown RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 BANK1Q8NDB2 785 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 DNAJB3Q8WWF6 145 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 HSD17B14Q9BPX1 270 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 NIFKQ9BYG3 293 aaKnown RBP17.23■□□□□ 0.35
TRIM47-206ENST00000592942 RGL1Q9NZL6 768 aa17.23■□□□□ 0.35
TRIM47-206ENST00000592942 TMEM150BA6NC51 233 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 MARCH6O60337 910 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 FGBP02675 491 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 OATP04181 439 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 P4HBP07237 508 aaKnown RBP17.22■□□□□ 0.35
TRIM47-206ENST00000592942 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 PRKCEQ02156 737 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 MGAT3Q09327 533 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 HERVK_113Q902F9 699 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
TRIM47-206ENST00000592942 NRBP2Q9NSY0 501 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 CXXC1Q9P0U4 656 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-206ENST00000592942 COL1A2P08123 1366 aa17.22■□□□□ 0.35
TRIM47-206ENST00000592942 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 DLL1O00548 723 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 CAND2O75155 1236 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 C22orf31O95567 290 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 QARSP47897 775 aaKnown RBP17.21■□□□□ 0.35
TRIM47-206ENST00000592942 PSMC5P62195 406 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 IL17AQ16552 155 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 ANO5Q75V66 913 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 OTOP2Q7RTS6 562 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 KIAA0319LQ8IZA0 1049 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 LINC01465Q8N7H1 131 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 FAM167AQ96KS9 214 aa17.21■□□□□ 0.35
TRIM47-206ENST00000592942 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.35
TRIM47-206ENST00000592942 ZBTB39O15060 712 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 PARNO95453 639 aaKnown RBP17.2■□□□□ 0.34
TRIM47-206ENST00000592942 PFKMP08237 780 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 TECP42680 631 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 PTGDRQ13258 359 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 XKR3Q5GH77 459 aa17.2■□□□□ 0.34
TRIM47-206ENST00000592942 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms