RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 TRIM10Q9UDY6 481 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 JRKLQ9Y4A0 524 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 FRMPD4Q14CM0 1322 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 NPHP3-ACAD11A0A0J9YXS1 232 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 EYA4O95677 639 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 MUTP22033 750 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 MTMR2Q13614 643 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 LRRC41Q15345 812 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 MCF2L2Q86YR7 1114 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 TRPM4Q8TD43 1214 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 MMS19Q96T76 1030 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 TSG101Q99816 390 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.11
RANBP3-229ENST00000592771 GPRC5DQ9NZD1 345 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 COL20A1Q9P218 1284 aa15.71■□□□□ 0.11
RANBP3-229ENST00000592771 SBF1O95248 1867 aa15.71■□□□□ 0.1
RANBP3-229ENST00000592771 NFIBO00712 420 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 TACC1O75410 805 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 FDX1P10109 184 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 BCRP11274 1271 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 SLC20A2Q08357 652 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 PABPC4Q13310 644 aaKnown RBP eCLIP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 DGKZQ13574 1117 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 GIT2Q14161 759 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 MAN2A1Q16706 1144 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 VWA3BQ502W6 1294 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 NIPA1Q7RTP0 329 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 PCMTD1Q96MG8 357 aaPredicted RBP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 FGFBP2Q9BYJ0 223 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 WDR11Q9BZH6 1224 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 PPP2R3BQ9Y5P8 575 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■■■□□ 18.7
RANBP3-229ENST00000592771 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 BACE1P56817 501 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 UBXN2AP68543 259 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 GPR162Q16538 588 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 HERC4Q5GLZ8 1057 aaPredicted RBP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 ANGEL2Q5VTE6 544 aaKnown RBP15.7■□□□□ 0.1
RANBP3-229ENST00000592771 GPC2Q8N158 579 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 MMGT1Q8N4V1 131 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 CCDC155Q8N6L0 562 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 GOLGA6L1Q8N7Z2 621 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 FAN1Q9Y2M0 1017 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 LOXHD1Q8IVV2 1947 aa15.7■□□□□ 0.1
RANBP3-229ENST00000592771 LRRIQ3A6PVS8 624 aaPredicted RBP15.69■□□□□ 0.1
RANBP3-229ENST00000592771 ENC1O14682 589 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 FLOT1O75955 427 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 SLITRK3O94933 977 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 ARP10275 920 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 PTPRAP18433 802 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 CYP4A11Q02928 519 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 KRT26Q7Z3Y9 468 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 COG1Q8WTW3 980 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 CEP63Q96MT8 703 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 RIT2Q99578 217 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 REEP2Q9BRK0 252 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 LACRTQ9GZZ8 138 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 NUCKS1Q9H1E3 243 aaKnown RBP15.69■□□□□ 0.1
RANBP3-229ENST00000592771 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 RPAP3Q9H6T3 665 aaPredicted RBP15.69■□□□□ 0.1
RANBP3-229ENST00000592771 AS3MTQ9HBK9 375 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 RGL1Q9NZL6 768 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 SIK3Q9Y2K2 1263 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 SSC5DA1L4H1 1573 aa15.69■□□□□ 0.1
RANBP3-229ENST00000592771 GAS7O60861 476 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 TFRCP02786 760 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 FKBP3Q00688 224 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 SPP2Q13103 211 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 CAGE1Q8TC20 777 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 ZNF577Q9BSK1 485 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 RAVER2Q9HCJ3 691 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 HDAC6Q9UBN7 1215 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 SNX12Q9UMY4 172 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 PJA2O43164 708 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 CAPN2P17655 700 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 ITGB5P18084 799 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 LMNB1P20700 586 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 MARSP56192 900 aaKnown RBP15.68■□□□□ 0.1
RANBP3-229ENST00000592771 RAD51AP2Q09MP3 1159 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 EPHA7Q15375 998 aa15.68■□□□□ 0.1
RANBP3-229ENST00000592771 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms