RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PCDHGA12O60330 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 MED26O95402 600 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 ARL4AP40617 200 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 CD97P48960 835 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 HERVK_113P62684 666 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 MOGSQ13724 837 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 RBM12BQ8IXT5 1001 aaKnown RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 AMOTL1Q8IY63 956 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 FLCNQ8NFG4 579 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 ZNF496Q96IT1 587 aaPredicted RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 NUP88Q99567 741 aaPredicted RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 SEMA6BQ9H3T3 888 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 RIC8BQ9NVN3 520 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 NUDT5Q9UKK9 219 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PALD1Q9ULE6 856 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 NOB1Q9ULX3 412 aaKnown RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA9Q9Y5G4 932 aaKnown RBP8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA8Q9Y5G5 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA7Q9Y5G6 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA6Q9Y5G7 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA3Q9Y5H0 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 PCDHGA2Q9Y5H1 932 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 KLHL33A6NCF5 533 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 FOXP2O15409 715 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
VMP1-215ENST00000592619 LTFP02788 710 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 CYBBP04839 570 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 CT47B1P0C2W7 299 aaPredicted RBP8.23□□□□□ -1.09
VMP1-215ENST00000592619 VCAM1P19320 739 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 GFOD2Q3B7J2 385 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 TIGD5Q53EQ6 642 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 CMTR2Q8IYT2 770 aaKnown RBP8.23□□□□□ -1.09
VMP1-215ENST00000592619 SSH1Q8WYL5 1049 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 PEX11GQ96HA9 241 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 TNFRSF12AQ9NP84 129 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 KCNG1Q9UIX4 513 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 MSRAQ9UJ68 235 aa8.23□□□□□ -1.09
VMP1-215ENST00000592619 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 H2AFYO75367 372 aaKnown RBP8.22□□□□□ -1.09
VMP1-215ENST00000592619 ZBTB7AO95365 584 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 DBHP09172 617 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 PF4V1P10720 104 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 ERVFC1P60507 584 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 GTF2H3Q13889 308 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 ODF1Q14990 250 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 FSCN1Q16658 493 aaKnown RBP8.22□□□□□ -1.09
VMP1-215ENST00000592619 PAQR3Q6TCH7 311 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 MILR1Q7Z6M3 343 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 RTF1Q92541 710 aaKnown RBP8.22□□□□□ -1.09
VMP1-215ENST00000592619 C19orf44Q9H6X5 657 aa8.22□□□□□ -1.09
VMP1-215ENST00000592619 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 ACOT7O00154 380 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 RAC2P15153 192 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 CYP2C19P33261 490 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 TPH2Q8IWU9 490 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 MYLIPQ8WY64 445 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 CCM2LQ9NUG4 571 aaPredicted RBP8.21□□□□□ -1.1
VMP1-215ENST00000592619 GPR160Q9UJ42 338 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 ANGEL1Q9UNK9 670 aaKnown RBP8.21□□□□□ -1.1
VMP1-215ENST00000592619 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 ASB1Q9Y576 335 aa8.21□□□□□ -1.1
VMP1-215ENST00000592619 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 KRT18P05783 430 aaKnown RBP8.2□□□□□ -1.1
VMP1-215ENST00000592619 ENPP1P22413 925 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 ERVFRD-1P60508 538 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 TCIRG1Q13488 830 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 MAP9Q49MG5 647 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 EFCAB2Q5VUJ9 269 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 CXorf67Q86X51 503 aaPredicted RBP8.2□□□□□ -1.1
VMP1-215ENST00000592619 PHYKPLQ8IUZ5 450 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 AGBL5Q8NDL9 886 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 ASB15Q8WXK1 588 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 FOXRED1Q96CU9 486 aaPredicted RBP8.2□□□□□ -1.1
VMP1-215ENST00000592619 HSPBAP1Q96EW2 488 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 WNT8AQ9H1J5 351 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 MBNL3Q9NUK0 354 aaKnown RBP8.2□□□□□ -1.1
VMP1-215ENST00000592619 HSPBP1Q9NZL4 362 aa8.2□□□□□ -1.1
VMP1-215ENST00000592619 ARID4BQ4LE39 1312 aaPredicted RBP8.2□□□□□ -1.1
VMP1-215ENST00000592619 LAMC3Q9Y6N6 1575 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 PRAMEF25A6NGN4 478 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 GOLGA6L22H0YM25 854 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 TMEM253P0C7T8 217 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 FAHP16930 419 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 TRHRP34981 398 aaPredicted RBP8.19□□□□□ -1.1
VMP1-215ENST00000592619 NR1I3Q14994 352 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 MINDY4Q4G0A6 757 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
VMP1-215ENST00000592619 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 ESPNLQ6ZVH7 1005 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 RTN4RL1Q86UN2 441 aaPredicted RBP8.19□□□□□ -1.1
VMP1-215ENST00000592619 DGKHQ86XP1 1220 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 E2F7Q96AV8 911 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 AIFM3Q96NN9 605 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 GBP4Q96PP9 640 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 ARNT2Q9HBZ2 717 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms