RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PSAPP07602 524 aa13□□□□□ -0.33
VMP1-211ENST00000591315 SELPP16109 830 aa13□□□□□ -0.33
VMP1-211ENST00000591315 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
VMP1-211ENST00000591315 MCM7P33993 719 aa13□□□□□ -0.33
VMP1-211ENST00000591315 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
VMP1-211ENST00000591315 FAM160B1Q5W0V3 765 aa13□□□□□ -0.33
VMP1-211ENST00000591315 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
VMP1-211ENST00000591315 SMAP1Q8IYB5 467 aaPredicted RBP13□□□□□ -0.33
VMP1-211ENST00000591315 BANK1Q8NDB2 785 aa13□□□□□ -0.33
VMP1-211ENST00000591315 CAGE1Q8TC20 777 aa13□□□□□ -0.33
VMP1-211ENST00000591315 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
VMP1-211ENST00000591315 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
VMP1-211ENST00000591315 SH2D3AQ9BRG2 576 aa13□□□□□ -0.33
VMP1-211ENST00000591315 FAM49AQ9H0Q0 323 aaPredicted RBP13□□□□□ -0.33
VMP1-211ENST00000591315 FOXP1Q9H334 677 aaPredicted RBP13□□□□□ -0.33
VMP1-211ENST00000591315 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
VMP1-211ENST00000591315 LOXHD1Q8IVV2 1947 aa13□□□□□ -0.33
VMP1-211ENST00000591315 IGSF9BQ9UPX0 1349 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 FGBP02675 491 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 RBL2Q08999 1139 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 SPIRE1Q08AE8 756 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 MCTP1Q6DN14 999 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 DNAJB3Q8WWF6 145 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 FAM20AQ96MK3 541 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
VMP1-211ENST00000591315 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
VMP1-211ENST00000591315 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 SIP14410 1827 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 A0A087WWV3 80 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 MARCH6O60337 910 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 HBP1O60381 514 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 NEMFO60524 1076 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 CHRNA1P02708 482 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 GNAT1P11488 350 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 U2AF2P26368 475 aaKnown RBP eCLIP12.98□□□□□ -0.33
VMP1-211ENST00000591315 KLRC1P26715 233 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 TXKP42681 527 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 JAK3P52333 1124 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 PRKCEQ02156 737 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 CALCRLQ16602 461 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 RASIP1Q5U651 963 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
VMP1-211ENST00000591315 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
VMP1-211ENST00000591315 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 RSPH10B2B2RC85 870 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 ZBTB39O15060 712 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 TBX3O15119 743 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 OATP04181 439 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 RSPH10BP0C881 870 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 SFNP31947 248 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 SLC26A2P50443 739 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 TMCO2Q7Z6W1 182 aaPredicted RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 HERVK_113Q902F9 699 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
VMP1-211ENST00000591315 PCDHB6Q9Y5E3 794 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 PCDHA2Q9Y5H9 948 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 PTPRSQ13332 1948 aa12.97□□□□□ -0.33
VMP1-211ENST00000591315 GBF1Q92538 1859 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 ZBBXA8MT70 800 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 H3BQV1 296 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 C22orf31O95567 290 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 CXCL10P02778 98 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 PBX2P40425 430 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 CYP4A11Q02928 519 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 MGAT3Q09327 533 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
VMP1-211ENST00000591315 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 PLA2G4FQ68DD2 849 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 Q7L0L9 218 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 FERMT3Q86UX7 667 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 KIAA0319LQ8IZA0 1049 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 RDM1Q8NG50 284 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
VMP1-211ENST00000591315 SNX21Q969T3 373 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 DYDC2Q96IM9 177 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 ZNF668Q96K58 619 aaPredicted RBP12.96□□□□□ -0.33
VMP1-211ENST00000591315 CEP89Q96ST8 783 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
VMP1-211ENST00000591315 CDHR5Q9HBB8 845 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms