RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 ACSF2Q96CM8 615 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-222ENST00000590619 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 FTHL17Q9BXU8 183 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 TMX1Q9H3N1 280 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 ENTPD7Q9NQZ7 604 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 PXMP2Q9NR77 195 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 IGSF9Q9P2J2 1179 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 PADI3Q9ULW8 664 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 TELO2Q9Y4R8 837 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 PCDHB7Q9Y5E2 793 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.56□□□□□ -1.2
DNMT1-222ENST00000590619 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
DNMT1-222ENST00000590619 NRCAMQ92823 1304 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 SPTLC1O15269 473 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 LILRB5O75023 590 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 PDHBP11177 359 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 MYCLP12524 364 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 IBSPP21815 317 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 UBA1P22314 1058 aaKnown RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 RFX1P22670 979 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 PPARAQ07869 468 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 SPEM2Q0P670 501 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 TAF2Q6P1X5 1199 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 XRRA1Q6P2D8 792 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 CEP85Q6P2H3 762 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 TMC5Q6UXY8 1006 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 LRRC55Q6ZSA7 311 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 ZBTB44Q8NCP5 570 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 GPR20Q99678 358 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 UBA5Q9GZZ9 404 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 EPC1Q9H2F5 836 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 FBXO4Q9UKT5 387 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 PCDHGA2Q9Y5H1 932 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
DNMT1-222ENST00000590619 FANCMQ8IYD8 2048 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 PLXNA4Q9HCM2 1894 aa7.55□□□□□ -1.2
DNMT1-222ENST00000590619 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 GPAA1O43292 621 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 CXCL14O95715 111 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 SLC3A2P08195 630 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 HSPD1P10809 573 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 EPCAMP16422 314 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 GNAT2P19087 354 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 KRT17Q04695 432 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 ZNF543Q08ER8 600 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 MARCH8Q5T0T0 291 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 UTP14CQ5TAP6 766 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 GPR149Q86SP6 731 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 RSPH3Q86UC2 560 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 SLC22A17Q8WUG5 538 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 NELL1Q92832 810 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 ZBTB10Q96DT7 871 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 PDCD2LQ9BRP1 358 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 ZSCAN32Q9NX65 697 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 FLNBO75369 2602 aaKnown RBP7.54□□□□□ -1.2
DNMT1-222ENST00000590619 MYH7BA7E2Y1 1941 aa7.54□□□□□ -1.2
DNMT1-222ENST00000590619 MBLAC1A4D2B0 266 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 M0R2C6 588 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 RNF113AO15541 343 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 LAMTOR5O43504 91 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 GDF9O60383 454 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 MGEA5O60502 916 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 RANBP6O60518 1105 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 GOLGA8HP0CJ92 632 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 FGFR1P11362 822 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 TOP1P11387 765 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 SRFP11831 508 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 LAG3P18627 525 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 PBX3P40426 434 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 STARD6P59095 220 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 FAM189BP81408 668 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 MRPS6P82932 125 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 CTDSPL2Q05D32 466 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 RING1Q06587 406 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 SMC1AQ14683 1233 aaKnown RBP7.53□□□□□ -1.2
DNMT1-222ENST00000590619 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 IER5Q5VY09 327 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 KCNT2Q6UVM3 1135 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 STOX1Q6ZVD7 989 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 CYFIP1Q7L576 1253 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 PJA1Q8NG27 643 aa7.53□□□□□ -1.2
DNMT1-222ENST00000590619 APPBP2Q92624 585 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms