RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 DTX3LQ8TDB6 740 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 RNF25Q96BH1 459 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 NLRP5P59047 1200 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 ZC3H18Q86VM9 953 aaKnown RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 MAIP1Q8WWC4 291 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 KIFAP3Q92845 792 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 SEMA4AQ9H3S1 761 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 DNAAF2Q9NVR5 837 aaKnown RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-228ENST00000590347 SRRM3A6NNA2 597 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 KCNQ2O43526 872 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 MYL1P05976 194 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 PTDSS1P48651 473 aaKnown RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ISLR2Q6UXK2 745 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 METTL13Q8N6R0 699 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 FMO2Q99518 471 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 RAB17Q9H0T7 212 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ZFYP08048 801 aaPredicted RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ADD2P35612 726 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 CCNFP41002 786 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 DEUP1Q05D60 604 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ITIH4Q14624 930 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 SLMAPQ14BN4 828 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 ASAP2O43150 1006 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 UBA7P41226 1012 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 PLS1Q14651 629 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.235e-13■□□□□ 10.6
CIRBP-228ENST00000590347 TLCD1Q96CP7 247 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 PBKQ96KB5 322 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 MOV10L1Q9BXT6 1211 aaKnown RBP16.48■□□□□ 0.23
CIRBP-228ENST00000590347 GREM2Q9H772 168 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 CTNNAL1Q9UBT7 734 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 SIK3Q9Y2K2 1263 aa16.48■□□□□ 0.23
CIRBP-228ENST00000590347 PDE6AP16499 860 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 FUT4P22083 530 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 EPHB2P29323 1055 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 GNAQP50148 359 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 PEX5P50542 639 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 MGAT5Q09328 741 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 HGSNATQ68CP4 663 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 BICDL1Q6ZP65 573 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 RNF10Q8N5U6 811 aaKnown RBP16.47■□□□□ 0.23
CIRBP-228ENST00000590347 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 DNAJC9Q8WXX5 260 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 BAP1Q92560 729 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 PHACTR1Q9C0D0 580 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 DISC1Q9NRI5 854 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 GALNT8Q9NY28 637 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 IQSEC3Q9UPP2 1182 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-228ENST00000590347 ZSCAN9O15535 394 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-228ENST00000590347 PEX11AO75192 247 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 COQ9O75208 318 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 BNIP1Q12981 228 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 LONRF1Q17RB8 773 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 VWA3BQ502W6 1294 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 AADACL2Q6P093 401 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 ARHGEF3Q9NR81 526 aa16.47■□□□□ 0.23
CIRBP-228ENST00000590347 MRC1P22897 1456 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 CUL1Q13616 776 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 RASIP1Q5U651 963 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 GALNT17Q6IS24 598 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-228ENST00000590347 NDNQ99608 321 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 PHF20Q9BVI0 1012 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-228ENST00000590347 CNOT10Q9H9A5 744 aaKnown RBP16.46■□□□□ 0.23
CIRBP-228ENST00000590347 TBK1Q9UHD2 729 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 YY1P25490 414 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 LIFRP42702 1097 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 EVX2Q03828 476 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 DDB1Q16531 1140 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 DENND2CQ68D51 928 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 LDHAL6AQ6ZMR3 332 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-228ENST00000590347 VSIG1Q86XK7 387 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 FBXO25Q8TCJ0 367 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 SNRNP27Q8WVK2 155 aaKnown RBP16.46■□□□□ 0.23
CIRBP-228ENST00000590347 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.234e-7■■■□□ 16.1
CIRBP-228ENST00000590347 ZMYND12Q9H0C1 365 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
CIRBP-228ENST00000590347 XBP1P17861 261 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CCNE1P24864 410 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
CIRBP-228ENST00000590347 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-228ENST00000590347 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms