RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 USP49Q70CQ1 688 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 SYMPKQ92797 1274 aaKnown RBP13.62□□□□□ -0.23
DNMT1-218ENST00000589294 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
DNMT1-218ENST00000589294 NIFKQ9BYG3 293 aaKnown RBP13.62□□□□□ -0.23
DNMT1-218ENST00000589294 RNPEPQ9H4A4 650 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 ANKEF1Q9NU02 776 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 DNM3Q9UQ16 869 aa13.62□□□□□ -0.23
DNMT1-218ENST00000589294 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 FAM237AA0A1B0GTK4 181 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 A0A1W2PQ45 241 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-218ENST00000589294 A0A1W2PQY0 241 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 RRN3P2A6NIE6 340 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 STBD1O95210 358 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 OATP04181 439 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 COL6A1P12109 1028 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 PTPN11Q06124 597 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-218ENST00000589294 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 UGCGQ16739 394 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 ZNF484Q5JVG2 852 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 TNS4Q8IZW8 715 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
DNMT1-218ENST00000589294 PPME1Q9Y570 386 aa13.61□□□□□ -0.23
DNMT1-218ENST00000589294 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 GNAT1P11488 350 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 YWHABP31946 246 aaKnown RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 PRKCEQ02156 737 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 GRB10Q13322 594 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 ECM1Q16610 540 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 RRAGBQ5VZM2 374 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 ANO5Q75V66 913 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 NECAB2Q7Z6G3 386 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 SLC43A3Q8NBI5 491 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 STARD7Q9NQZ5 370 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 DDX19AQ9NUU7 478 aaKnown RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 WRAP73Q9P2S5 460 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-218ENST00000589294 KCNH3Q9ULD8 1083 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 NRCAMQ92823 1304 aa13.6□□□□□ -0.23
DNMT1-218ENST00000589294 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 EYA4O95677 639 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 INSRRP14616 1297 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 MARK3P27448 753 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 CDK7P50613 346 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 UBE2HP62256 183 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 PSMC6P62333 389 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 KARSQ15046 597 aaKnown RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 TARBP2Q15633 366 aaKnown RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 ZRSR1Q15695 479 aaKnown RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 C1orf53Q5VUE5 145 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
DNMT1-218ENST00000589294 STK17AQ9UEE5 414 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 HPSEQ9Y251 543 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 GRIN2DO15399 1336 aa13.59□□□□□ -0.23
DNMT1-218ENST00000589294 COL1A2P08123 1366 aa13.58□□□□□ -0.23
DNMT1-218ENST00000589294 BRCA2P51587 3418 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 A0A1B0GVL5 298 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 ARVCFO00192 962 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 ZBTB39O15060 712 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 MAGEB2O15479 319 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 SMIM10L2AP0DMW4 78 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 SMIM10L2BP0DMW5 78 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 PLCG1P19174 1290 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 HOXC8P31273 242 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 SLC39A5Q6ZMH5 540 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 UBE2Q1Q7Z7E8 422 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
DNMT1-218ENST00000589294 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms