RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 ACTN1P12814 892 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 RFC2P35250 354 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 GHRHRQ02643 423 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 TROAPQ12815 778 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 NR1H3Q13133 447 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 SART3Q15020 963 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 PGM5Q15124 567 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 DGKDQ16760 1214 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 KIAA0753Q2KHM9 967 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 LRRC8DQ7L1W4 858 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 SPRED2Q7Z698 418 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 DHX37Q8IY37 1157 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 MB21D2Q8IYB1 491 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 CCDC155Q8N6L0 562 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 NCOA7Q8NI08 942 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 PPTC7Q8NI37 304 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 WNT8BQ93098 351 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 SLC9A7Q96T83 725 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 CERS4Q9HA82 394 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 THEGQ9P2T0 379 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 HDAC6Q9UBN7 1215 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 GTF2IRD1Q9UHL9 959 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 PCDHA11Q9Y5I1 949 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 RBM8AQ9Y5S9 174 aaKnown RBP8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 TET1Q8NFU7 2136 aa8.05□□□□□ -1.12
NEDD4L-226ENST00000589167 BAZ2BQ9UIF8 2168 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 KIAA1217Q5T5P2 1943 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 EPOPA6NHQ4 379 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 GCOM1H8Y6P7 765 aaPredicted RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 RFXAPO00287 272 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 SPINT1O43278 529 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 POLR2MP0CAP2 368 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 SELPP16109 830 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 CASTP20810 708 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 CCND2P30279 289 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 KCNJ6P48051 423 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 RAB15P59190 212 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 ZNF200P98182 395 aaPredicted RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 LAMC2Q13753 1193 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 COL9A3Q14050 684 aaPredicted RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 TCTN1Q2MV58 587 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 TMCO2Q7Z6W1 182 aaPredicted RBP8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 CATIPQ7Z7H3 387 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 RAB11FIP4Q86YS3 637 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 ZNF654Q8IZM8 581 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 C7orf31Q8N865 590 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 CAGE1Q8TC20 777 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 AFAP1L1Q8TED9 768 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 KATNAL1Q9BW62 490 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 MAF1Q9H063 256 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 RIOX1Q9H6W3 641 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 LY9Q9HBG7 655 aa8.04□□□□□ -1.12
NEDD4L-226ENST00000589167 FRMPD4Q14CM0 1322 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 COL4A4P53420 1690 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 LCHNA4D1U4 455 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 HAS3O00219 553 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PRC1O43663 620 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 NBNO60934 754 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PLEKHA8P1O95397 391 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 CKBP12277 381 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 RXRAP19793 462 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 WDR5P61964 334 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 DEFB103AP81534 67 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 RELBQ01201 579 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 SP2Q02086 613 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 SP4Q02446 784 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PTSQ03393 145 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 RBL2Q08999 1139 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 GPNMBQ14956 572 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 TRIM71Q2Q1W2 868 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 CELF3Q5SZQ8 465 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 KRT40Q6A162 431 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 VSIG10LQ86VR7 867 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 SKAP1Q86WV1 359 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 HERC6Q8IVU3 1022 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 CTCFLQ8NI51 663 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 ARNTL2Q8WYA1 636 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 BCAS3Q9H6U6 928 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 TMPRSS4Q9NRS4 437 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PCDHB9Q9Y5E1 797 aa8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 PRRC2BQ5JSZ5 2229 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-226ENST00000589167 BDP1A6H8Y1 2624 aa8.02□□□□□ -1.12
NEDD4L-226ENST00000589167 PTPRSQ13332 1948 aa8.02□□□□□ -1.13
NEDD4L-226ENST00000589167 NOP56O00567 594 aaKnown RBP8.02□□□□□ -1.13
NEDD4L-226ENST00000589167 SH2B2O14492 632 aaPredicted RBP8.02□□□□□ -1.13
NEDD4L-226ENST00000589167 DDAH1O94760 285 aa8.02□□□□□ -1.13
NEDD4L-226ENST00000589167 BAIAP3O94812 1187 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms