RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 GLG1Q92896 1179 aa16.18■□□□□ 0.18
NPC1-207ENST00000588867 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
NPC1-207ENST00000588867 CCDC43Q96MW1 224 aaKnown RBP16.18■□□□□ 0.18
NPC1-207ENST00000588867 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 MYMKA6NI61 221 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 ZNF862O60290 1169 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 CYBAP13498 195 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 AKR1A1P14550 325 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 SLC12A3P55017 1021 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
NPC1-207ENST00000588867 PCYT2Q99447 389 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 C7orf25Q9BPX7 421 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 TRIM9Q9C026 710 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 BMP2KQ9NSY1 1161 aaPredicted RBP16.17■□□□□ 0.18
NPC1-207ENST00000588867 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
NPC1-207ENST00000588867 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
NPC1-207ENST00000588867 TMEM150BA6NC51 233 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 LYPLA2O95372 231 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 KRT18P05783 430 aaKnown RBP16.16■□□□□ 0.18
NPC1-207ENST00000588867 MYL1P05976 194 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
NPC1-207ENST00000588867 ZNF445P59923 1031 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 ASIC1P78348 528 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PRKCEQ02156 737 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 DDX12PQ92771 950 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 TUBE1Q9UJT0 475 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 GNEQ9Y223 722 aaKnown RBP16.16■□□□□ 0.18
NPC1-207ENST00000588867 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 HMGCRP04035 888 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PRMT2P55345 433 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PLA2G4FQ68DD2 849 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 OTUD6AQ7L8S5 288 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 TRIM50Q86XT4 487 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
NPC1-207ENST00000588867 IGSF9BQ9UPX0 1349 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 RPN1P04843 607 aaKnown RBP16.15■□□□□ 0.18
NPC1-207ENST00000588867 XRCC6P12956 609 aaKnown RBP eCLIP16.15■□□□□ 0.18
NPC1-207ENST00000588867 CYP11B2P19099 503 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 ATP4AP20648 1035 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 MARK3P27448 753 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 SARSP49591 514 aaKnown RBP16.15■□□□□ 0.18
NPC1-207ENST00000588867 TYRO3Q06418 890 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 ANO5Q75V66 913 aa16.15■□□□□ 0.18
NPC1-207ENST00000588867 SEPT9Q9UHD8 586 aaPredicted RBP16.15■□□□□ 0.18
NPC1-207ENST00000588867 DBR1Q9UK59 544 aaKnown RBP16.15■□□□□ 0.18
NPC1-207ENST00000588867 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 LGR5O75473 907 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 IDEP14735 1019 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
NPC1-207ENST00000588867 RARRES1P49788 294 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 NPEPPSP55786 919 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
NPC1-207ENST00000588867 ARSHQ5FYA8 562 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 XKR3Q5GH77 459 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 RINT1Q6NUQ1 792 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 GSDMAQ96QA5 445 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 SMARCAD1Q9H4L7 1026 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 ANKEF1Q9NU02 776 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 MAN1B1Q9UKM7 699 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 PTCH2Q9Y6C5 1203 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 STBD1O95210 358 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 OATP04181 439 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 MMP3P08254 477 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 PADI6Q6TGC4 694 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 POLD4Q9HCU8 107 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 NRBP2Q9NSY0 501 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 CEP350Q5VT06 3117 aa16.14■□□□□ 0.17
NPC1-207ENST00000588867 SEPT4O43236 478 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 LGALS2P05162 132 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 GRK4P32298 578 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
NPC1-207ENST00000588867 DGKDQ16760 1214 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 KMT5BQ4FZB7 885 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 PLPPR4Q7Z2D5 763 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 CCDC47Q96A33 483 aaKnown RBP16.13■□□□□ 0.17
NPC1-207ENST00000588867 FUCA2Q9BTY2 467 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 ZHX3Q9H4I2 956 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 Q9Y3F1 56 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
NPC1-207ENST00000588867 DUSP11O75319 330 aaKnown RBP16.12■□□□□ 0.17
NPC1-207ENST00000588867 ZNF286BP0CG31 522 aa16.12■□□□□ 0.17
NPC1-207ENST00000588867 NLRP12P59046 1061 aa16.12■□□□□ 0.17
NPC1-207ENST00000588867 STX1AQ16623 288 aa16.12■□□□□ 0.17
NPC1-207ENST00000588867 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms