RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 AKAP11Q9UKA4 1901 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 SEMA3EO15041 775 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 DHX9Q08211 1270 aaKnown RBP13.26□□□□□ -0.29
LRFN3-204ENST00000588831 NEK8Q86SG6 692 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 VSIG1Q86XK7 387 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 ARHGEF2Q92974 986 aaKnown RBP13.26□□□□□ -0.29
LRFN3-204ENST00000588831 C6orf50Q9HD87 102 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 TAF1P21675 1872 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 SLIT3O75094 1523 aa13.26□□□□□ -0.29
LRFN3-204ENST00000588831 GMNCA6NCL1 334 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 ATP6V1G2O95670 118 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 SERPINB4P48594 390 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 MRPL12P52815 198 aaKnown RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 COG7P83436 770 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 GRIK3Q13003 919 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 MIIPQ5JXC2 388 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 LMBRD2Q68DH5 695 aaPredicted RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 TTBK2Q6IQ55 1244 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 CELF4Q9BZC1 486 aaKnown RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 THAP9Q9H5L6 903 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 KCNK9Q9NPC2 374 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 KIAA1024Q9UPX6 916 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 DDR1Q08345 913 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 CNNM4Q6P4Q7 775 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 ZNF512BQ96KM6 892 aaPredicted RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 C15orf41Q9Y2V0 281 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 FERP16591 822 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 GBP1P32455 592 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 SLCO1A2P46721 670 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 AMPD3Q01432 767 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 PAK2Q13177 524 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 NFIXQ14938 502 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 CFAP221Q4G0U5 840 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 ZC3H18Q86VM9 953 aaKnown RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
LRFN3-204ENST00000588831 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
LRFN3-204ENST00000588831 A0A087X0T9 212 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CHMP2AO43633 222 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 NTSR2O95665 410 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 FAM228BP0C875 321 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 SFMBT2Q5VUG0 894 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 TSG101Q99816 390 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 LMCD1Q9NZU5 365 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 SCOCQ9UIL1 159 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CAPN15O75808 1086 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CACNB3P54284 484 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 RAD23BP54727 409 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 USH1GQ495M9 461 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 MLXIPLQ9NP71 852 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 C4AP0C0L4 1744 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 C4BP0C0L5 1744 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 RHOBTB3O94955 611 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 TCP10Q12799 353 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 PABPC4Q13310 644 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRFN3-204ENST00000588831 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
LRFN3-204ENST00000588831 PTGISQ16647 500 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 SLC9C1Q4G0N8 1177 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
LRFN3-204ENST00000588831 IFT20Q8IY31 132 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 CEP70Q8NHQ1 597 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 TLR10Q9BXR5 811 aa13.24□□□□□ -0.29
LRFN3-204ENST00000588831 IQCGQ9H095 443 aaKnown RBP13.24□□□□□ -0.29
LRFN3-204ENST00000588831 STXBP3O00186 592 aa13.23□□□□□ -0.29
LRFN3-204ENST00000588831 OPHN1O60890 802 aa13.23□□□□□ -0.29
LRFN3-204ENST00000588831 UFL1O94874 794 aa13.23□□□□□ -0.29
LRFN3-204ENST00000588831 ATP4AP20648 1035 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms