RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 LARP4BQ92615 738 aaKnown RBP25.27■■□□□ 1.64
ACTN4-210ENST00000588618 LOXHD1Q8IVV2 1947 aa25.27■■□□□ 1.64
ACTN4-210ENST00000588618 ZNF862O60290 1169 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 MSCO60682 206 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 PPFIA4O75335 1185 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 PRR29P0C7W0 189 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 CASP1P29466 404 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 TRMT1LQ7Z2T5 733 aaKnown RBP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 C4orf19Q8IY42 314 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 RAD54LQ92698 747 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 PAGE5Q96GU1 130 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 GZF1Q9H116 711 aaPredicted RBP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 SSBP05455 408 aaKnown RBP eCLIP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 MMP3P08254 477 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 C6orf222P0C671 652 aaPredicted RBP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 IRX5P78411 483 aaPredicted RBP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 MCM6Q14566 821 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 ARID2Q68CP9 1835 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 PIGOQ8TEQ8 1089 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 TNMDQ9H2S6 317 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 SMARCAD1Q9H4L7 1026 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 KBTBD4Q9NVX7 518 aa25.26■■□□□ 1.63
ACTN4-210ENST00000588618 MAFBQ9Y5Q3 323 aaPredicted RBP25.26■■□□□ 1.63
ACTN4-210ENST00000588618 EMSYQ7Z589 1322 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 IGSF9BQ9UPX0 1349 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 AFMP43652 599 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 AMPD3Q01432 767 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 DHX8Q14562 1220 aaKnown RBP25.25■■□□□ 1.63
ACTN4-210ENST00000588618 PKN2Q16513 984 aaKnown RBP25.25■■□□□ 1.63
ACTN4-210ENST00000588618 SV2BQ7L1I2 683 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 AFAP1L1Q8TED9 768 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 XPNPEP3Q9NQH7 507 aa25.25■■□□□ 1.63
ACTN4-210ENST00000588618 DDX20Q9UHI6 824 aaKnown RBP25.25■■□□□ 1.63
ACTN4-210ENST00000588618 ZNF215Q9UL58 517 aaPredicted RBP25.25■■□□□ 1.63
ACTN4-210ENST00000588618 A6NJR5 290 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 LYPLA2O95372 231 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 YWHABP31946 246 aaKnown RBP25.24■■□□□ 1.63
ACTN4-210ENST00000588618 PRKCEQ02156 737 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 PNOCQ13519 176 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 FSCN1Q16658 493 aaKnown RBP25.24■■□□□ 1.63
ACTN4-210ENST00000588618 ZSCAN23Q3MJ62 389 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 RBM43Q6ZSC3 357 aaKnown RBP25.24■■□□□ 1.63
ACTN4-210ENST00000588618 OTUD6AQ7L8S5 288 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 DNAH12Q6ZR08 3092 aa25.24■■□□□ 1.63
ACTN4-210ENST00000588618 TMEM150BA6NC51 233 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 CTAGE5O15320 804 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 LGR5O75473 907 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 STBD1O95210 358 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 LGALS2P05162 132 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 ATP4AP20648 1035 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 SLC26A2P50443 739 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 FBXO46Q6PJ61 603 aaPredicted RBP25.23■■□□□ 1.63
ACTN4-210ENST00000588618 PLPPR4Q7Z2D5 763 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 TRIM50Q86XT4 487 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 LRRC27Q9C0I9 530 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 BHMT2Q9H2M3 363 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 SYNRGQ9UMZ2 1314 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 EYA4O95677 639 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 PLA2G4BP0C869 781 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 GJA9P57773 515 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 FAM167AQ96KS9 214 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 ERAP1Q9NZ08 941 aa25.23■■□□□ 1.63
ACTN4-210ENST00000588618 SEPT9Q9UHD8 586 aaPredicted RBP25.23■■□□□ 1.63
ACTN4-210ENST00000588618 ZEB2O60315 1214 aa25.22■■□□□ 1.63
ACTN4-210ENST00000588618 MYCNP04198 464 aaPredicted RBP25.22■■□□□ 1.63
ACTN4-210ENST00000588618 XRCC6P12956 609 aaKnown RBP eCLIP25.22■■□□□ 1.638e-6■■□□□ 13.6
ACTN4-210ENST00000588618 SLC12A3P55017 1021 aa25.22■■□□□ 1.63
ACTN4-210ENST00000588618 POSTNQ15063 836 aa25.22■■□□□ 1.63
ACTN4-210ENST00000588618 XKR3Q5GH77 459 aa25.22■■□□□ 1.63
ACTN4-210ENST00000588618 ELOA2Q8IYF1 753 aaPredicted RBP25.22■■□□□ 1.63
ACTN4-210ENST00000588618 ARHGEF35A5YM69 484 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 PGK1P00558 417 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 OATP04181 439 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 ZNF286BP0CG31 522 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 MARK3P27448 753 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 CUL4BQ13620 913 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 GNASQ5JWF2 1037 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 BLZF1Q9H2G9 400 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 NRBP2Q9NSY0 501 aa25.21■■□□□ 1.63
ACTN4-210ENST00000588618 BMP2KQ9NSY1 1161 aaPredicted RBP25.21■■□□□ 1.63
ACTN4-210ENST00000588618 HOXD8P13378 290 aaPredicted RBP25.2■■□□□ 1.63
ACTN4-210ENST00000588618 BEX3Q00994 111 aa25.2■■□□□ 1.63
ACTN4-210ENST00000588618 SH2D3AQ9BRG2 576 aa25.2■■□□□ 1.63
ACTN4-210ENST00000588618 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.2■■□□□ 1.631e-7■■■■■ 28.5
ACTN4-210ENST00000588618 ANKEF1Q9NU02 776 aa25.2■■□□□ 1.63
ACTN4-210ENST00000588618 DBR1Q9UK59 544 aaKnown RBP25.2■■□□□ 1.63
ACTN4-210ENST00000588618 FRMPD3Q5JV73 1810 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 SYCE3A1L190 88 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 MYMKA6NI61 221 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 MYL3P08590 195 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 XKR9Q5GH70 373 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 ANO5Q75V66 913 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 SYT2Q8N9I0 419 aaPredicted RBP25.2■■□□□ 1.62
ACTN4-210ENST00000588618 UPF3AQ9H1J1 476 aaKnown RBP25.2■■□□□ 1.62
ACTN4-210ENST00000588618 TRPC6Q9Y210 931 aa25.2■■□□□ 1.62
ACTN4-210ENST00000588618 H3BRB1 525 aa25.19■■□□□ 1.62
ACTN4-210ENST00000588618 KPNA6O60684 536 aa25.19■■□□□ 1.62
ACTN4-210ENST00000588618 MYCP01106 439 aaPredicted RBP25.19■■□□□ 1.62
ACTN4-210ENST00000588618 KRT18P05783 430 aaKnown RBP25.19■■□□□ 1.62
ACTN4-210ENST00000588618 MYL1P05976 194 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms