RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 TELO2Q9Y4R8 837 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 NR2E3Q9Y5X4 410 aa10.16□□□□□ -0.78
CIRBP-218ENST00000588344 IGSF9BQ9UPX0 1349 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 KDM3AQ9Y4C1 1321 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 EVI5O60447 810 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CUTAO60888 179 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CD4P01730 458 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 INSRRP14616 1297 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 ATP4AP20648 1035 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 MARK3P27448 753 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 HOXC8P31273 242 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 TXLNAP40222 546 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 RTP1P59025 263 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CDC42EP1Q00587 391 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 PRKCEQ02156 737 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CEBPZQ03701 1054 aaKnown RBP10.15□□□□□ -0.78
CIRBP-218ENST00000588344 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
CIRBP-218ENST00000588344 PPFIA1Q13136 1202 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 LRRC26Q2I0M4 334 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 TAF2Q6P1X5 1199 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CATSPER3Q86XQ3 398 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 TRIM50Q86XT4 487 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 FAM126BQ8IXS8 530 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 NME8Q8N427 588 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 DPF3Q92784 378 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 CALML4Q96GE6 196 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 LXNQ9BS40 222 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 HDAC6Q9UBN7 1215 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 PRKAG2Q9UGJ0 569 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
CIRBP-218ENST00000588344 POTEMA6NI47 508 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 ZNF862O60290 1169 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 PQBP1O60828 265 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CAND2O75155 1236 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 SPATA31C1P0DKV0 1188 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 TMOD1P28289 359 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 MARCKSP29966 332 aaPredicted RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 YWHABP31946 246 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CCT6AP40227 531 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 DNM2P50570 870 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 ADAM17P78536 824 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 TLE2Q04725 743 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 PTK7Q13308 1070 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 BFSP2Q13515 415 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 GRIK4Q16099 956 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 IL17AQ16552 155 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 PTGISQ16647 500 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 TRIM60Q495X7 471 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 HYIQ5T013 277 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 FAM43BQ6ZT52 329 aaPredicted RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 RSPH3Q86UC2 560 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CABP7Q86V35 215 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 BANK1Q8NDB2 785 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CDK5RAP3Q96JB5 506 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 SPATA32Q96LK8 384 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 PYM1Q9BRP8 204 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 SETD4Q9NVD3 440 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 FBXO2Q9UK22 296 aaPredicted RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 DBR1Q9UK59 544 aaKnown RBP10.14□□□□□ -0.79
CIRBP-218ENST00000588344 ATP11BQ9Y2G3 1177 aa10.14□□□□□ -0.79
CIRBP-218ENST00000588344 MBLAC1A4D2B0 266 aaPredicted RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 B4GALT4O60513 344 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CLTBP09497 229 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 KLRC1P26715 233 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 RFC5P40937 340 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 ME1P48163 572 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CYP4A11Q02928 519 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 FAAP100Q0VG06 881 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 TARBP2Q15633 366 aaKnown RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 UGCGQ16739 394 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 FOXD4L6Q3SYB3 417 aaPredicted RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 GDF6Q6KF10 455 aaPredicted RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 FOXD4L3Q6VB84 417 aaPredicted RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 SERINC5Q86VE9 423 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CAGE1Q8TC20 777 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 SLC7A3Q8WY07 619 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CEP170P1Q96L14 293 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
CIRBP-218ENST00000588344 FTOQ9C0B1 505 aaKnown RBP eCLIP10.13□□□□□ -0.798e-7■□□□□ 9.3
CIRBP-218ENST00000588344 CSRNP2Q9H175 543 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 CYP26B1Q9NR63 512 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 TMEM39AQ9NV64 488 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 FAM13BQ9NYF5 915 aa10.13□□□□□ -0.79
CIRBP-218ENST00000588344 TUBE1Q9UJT0 475 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms