RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 USP11P51784 963 aa18.33■□□□□ 0.52
SSC5D-203ENST00000588254 TATDN2Q93075 761 aa18.33■□□□□ 0.52
SSC5D-203ENST00000588254 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
SSC5D-203ENST00000588254 ABCF3Q9NUQ8 709 aa18.33■□□□□ 0.52
SSC5D-203ENST00000588254 RNF14Q9UBS8 474 aa18.33■□□□□ 0.52
SSC5D-203ENST00000588254 UTP11Q9Y3A2 253 aaKnown RBP18.33■□□□□ 0.52
SSC5D-203ENST00000588254 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 NAIF1Q69YI7 327 aaPredicted RBP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 FMO2Q99518 471 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 NUP98P52948 1817 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 F8VZ95 297 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 CHMP6Q96FZ7 201 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 XPO6Q96QU8 1125 aaKnown RBP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 ERVK-5Q9HDB9 667 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
SSC5D-203ENST00000588254 MYH7BA7E2Y1 1941 aa18.32■□□□□ 0.52
SSC5D-203ENST00000588254 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 TRIM37O94972 964 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 POTEIP0CG38 1075 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 DRD4P21917 467 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 ITPK1Q13572 414 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 POTEGQ6S5H5 508 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 GLYCTKQ8IVS8 523 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 CCDC63Q8NA47 563 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 CCDC197Q8NCU1 140 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 NSMCE1Q8WV22 266 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 ACTR5Q9H9F9 607 aaPredicted RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 MAGEF1Q9HAY2 307 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 UCHL3P15374 230 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 CASP4P49662 377 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 ELF3P78545 371 aaPredicted RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 PICALMQ13492 652 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 EPS8L3Q8TE67 593 aaKnown RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 DYDC1Q8WWB3 177 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 EMILIN3Q9NT22 766 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 DOCK2Q92608 1830 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 RASA1P20936 1047 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 KCNJ2P63252 427 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 KCNA1Q09470 495 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 CUL1Q13616 776 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 TPCN2Q8NHX9 752 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 KCNV2Q8TDN2 545 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 SCFD1Q8WVM8 642 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 BMP2KQ9NSY1 1161 aaPredicted RBP18.31■□□□□ 0.52
SSC5D-203ENST00000588254 ANKIB1Q9P2G1 1089 aa18.31■□□□□ 0.52
SSC5D-203ENST00000588254 ATP6V1G2O95670 118 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 CYP4A11Q02928 519 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 ANKRD42Q8N9B4 389 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 SCFD2Q8WU76 684 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 CCT6BQ92526 530 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 DNAJC19Q96DA6 116 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 TRIM33Q9UPN9 1127 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
SSC5D-203ENST00000588254 PVALEFA0A1B0GWK0 134 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
SSC5D-203ENST00000588254 TAL1P17542 331 aaPredicted RBP18.3■□□□□ 0.52
SSC5D-203ENST00000588254 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 FBXO25Q8TCJ0 367 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 LBHD1Q9BQE6 289 aaPredicted RBP18.3■□□□□ 0.52
SSC5D-203ENST00000588254 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
SSC5D-203ENST00000588254 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 LDHBP07195 334 aaKnown RBP18.29■□□□□ 0.52
SSC5D-203ENST00000588254 PPP1R2P41236 205 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 SLC29A2Q14542 456 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 EXOC3L4Q17RC7 722 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 FAM167BQ9BTA0 163 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 DDX25Q9UHL0 483 aaKnown RBP18.29■□□□□ 0.52
SSC5D-203ENST00000588254 PCDHA12Q9UN75 941 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 AGAP1Q9UPQ3 857 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 ADAMTSL3P82987 1691 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 ATXN2Q99700 1313 aaKnown RBP18.29■□□□□ 0.52
SSC5D-203ENST00000588254 LRRN2O75325 713 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 GANQ9H2C0 597 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 CASZ1Q86V15 1759 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 IGSF9BQ9UPX0 1349 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 BIRC3Q13489 604 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
SSC5D-203ENST00000588254 USP17L6PQ6QN14 398 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms