RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SHC4Q6S5L8 630 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 C4orf19Q8IY42 314 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 CKAP2LQ8IYA6 745 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SLC43A3Q8NBI5 491 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 ERMNQ8TAM6 284 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 NEK9Q8TD19 979 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SNX29Q8TEQ0 813 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
SMARCA4-213ENST00000587988 AK8Q96MA6 479 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 PNMA5Q96PV4 448 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 PLIN2Q99541 437 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 TUFT1Q9NNX1 390 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 ZBTB42B2RXF5 422 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ARVCFO00192 962 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 CUTAO60888 179 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 OATP04181 439 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 INSRRP14616 1297 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 SLC26A2P50443 739 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 CDK7P50613 346 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ZNF200P98182 395 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 GRB10Q13322 594 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ZRSR1Q15695 479 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 LRRC26Q2I0M4 334 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 FAM47CQ5HY64 1035 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 HAUS3Q68CZ6 603 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 GDF6Q6KF10 455 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ANO5Q75V66 913 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 CABP7Q86V35 215 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 PIGOQ8TEQ8 1089 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 LRRC15Q8TF66 581 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ATP6V0A1Q93050 837 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-213ENST00000587988 A0A087X0B3 334 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 HBP1O60381 514 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 LYPLA2O95372 231 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 HOXC8P31273 242 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 YWHABP31946 246 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 UBA7P41226 1012 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 NPEPPSP55786 919 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 IGBP1P78318 339 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 SNX17Q15036 470 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 KARSQ15046 597 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 GRIK4Q16099 956 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 TRIM60Q495X7 471 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 HYIQ5T013 277 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 MARCH8Q5T0T0 291 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 ADALQ6DHV7 355 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 C7orf31Q8N865 590 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 LMBR1Q8WVP7 490 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 ZBTB10Q96DT7 871 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 CTAGE1Q96RT6 745 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 CEP89Q96ST8 783 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 NIFKQ9BYG3 293 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 CCSER1Q9C0I3 900 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 NRBP2Q9NSY0 501 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 GTF2IRD1Q9UHL9 959 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 KAT6AQ92794 2004 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
SMARCA4-213ENST00000587988 NRCAMQ92823 1304 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 E9PMD0 336 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 TREHO43280 583 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 B4GALT4O60513 344 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 DKC1O60832 514 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 RTP1P59025 263 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 ADAM17P78536 824 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 TARBP2Q15633 366 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 MTERF2Q49AM1 385 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 TMEM119Q4V9L6 283 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 C1orf53Q5VUE5 145 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 RESP18Q5W5W9 173 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 CLEC17AQ6ZS10 378 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 FAM167AQ96KS9 214 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 PANK2Q9BZ23 570 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 DDX19AQ9NUU7 478 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-213ENST00000587988 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 PLCG1P19174 1290 aa11.96□□□□□ -0.49
SMARCA4-213ENST00000587988 MUTP22033 750 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms