RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 PRDM5Q9NQX1 630 aaPredicted RBP4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 TPSG1Q9NRR2 321 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 INTS7Q9NVH2 962 aaKnown RBP4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 NDOR1Q9UHB4 597 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 DIS3Q9Y2L1 958 aaKnown RBP4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 ATP8A1Q9Y2Q0 1164 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 RAXQ9Y2V3 346 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 MAP3K19Q56UN5 1328 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 USP42Q9H9J4 1324 aaKnown RBP4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 SSC5DA1L4H1 1573 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 TJP1Q07157 1748 aa4.34□□□□□ -1.71
LDLRAD4-209ENST00000587440 ITGB4P16144 1822 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 COL5A3P25940 1745 aaPredicted RBP4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CGNL1Q0VF96 1302 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 STXBP3O00186 592 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 ARNTLO00327 626 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 MEIS1O00470 390 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 RASGRP1O95267 797 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CBX7O95931 251 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 F13BP05160 661 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 SRFP11831 508 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CNGA1P29973 690 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 HOXC12P31275 282 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 SREBF2Q12772 1141 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 DPY19L1Q2PZI1 675 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 PLA2G4EQ3MJ16 856 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 SFRP5Q5T4F7 317 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 STRA8Q7Z7C7 330 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 DDX42Q86XP3 938 aaKnown RBP eCLIP4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 MYLIPQ8WY64 445 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 COPS5Q92905 334 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 COX4I2Q96KJ9 171 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 IPO9Q96P70 1041 aaKnown RBP4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 DSCC1Q9BVC3 393 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CAAP1Q9H8G2 361 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CYP26B1Q9NR63 512 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 CHST7Q9NS84 486 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 MAGEC2Q9UBF1 373 aaPredicted RBP4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 TRAF6Q9Y4K3 522 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 ZNF318Q5VUA4 2279 aa4.33□□□□□ -1.72
LDLRAD4-209ENST00000587440 BPTFQ12830 3046 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 COL11A2P13942 1736 aaPredicted RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 FAM205AQ6ZU69 1335 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 CDHR2Q9BYE9 1310 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ANP32CO43423 234 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 MARCH6O60337 910 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 RPS6KA4O75676 772 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 PROCP04070 461 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 THBDP07204 575 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 PDGFRBP09619 1106 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 CYP7A1P22680 504 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ECI1P42126 302 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 KIR3DL1P43629 444 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 GATA4P43694 442 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 KCNJ6P48051 423 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 GABREP78334 506 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 AMPD2Q01433 879 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 SCRN1Q12765 414 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ITPK1Q13572 414 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ARHGEF6Q15052 776 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 SEPT7Q16181 437 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 CCDC93Q567U6 631 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 RNF43Q68DV7 783 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 CNNM4Q6P4Q7 775 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 PKN3Q6P5Z2 889 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 KCNT2Q6UVM3 1135 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 NPLOC4Q8TAT6 608 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 PIWIL2Q8TC59 973 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 JDP2Q8WYK2 163 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 DDX1Q92499 740 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 PTPRN2Q92932 1015 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 TP53INP1Q96A56 240 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 MFSD14AQ96MC6 490 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 TBC1D32Q96NH3 1257 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 SEMA6BQ9H3T3 888 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 C14orf93Q9H972 538 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 TYW1Q9NV66 732 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 MAPRE3Q9UPY8 281 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 SF3B6Q9Y3B4 125 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 TNPO3Q9Y5L0 923 aaKnown RBP4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ST14Q9Y5Y6 855 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 ANKRD26Q9UPS8 1709 aa4.32□□□□□ -1.72
LDLRAD4-209ENST00000587440 SLX4Q8IY92 1834 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 WASH4PA8MWX3 477 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 AURKAO14965 403 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 FARP2O94887 1054 aaPredicted RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 PARNO95453 639 aaKnown RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 EYA4O95677 639 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 CD3EP07766 207 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 IFNGR1P15260 489 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 POU3F2P20265 443 aaPredicted RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 SOX5P35711 763 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 PDE6BP35913 854 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 IARSP41252 1262 aaKnown RBP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 OXCT1P55809 520 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 FKBP1BP68106 108 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 PCBP1Q15365 356 aaKnown RBP eCLIP4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 NKPD1Q17RQ9 610 aa4.31□□□□□ -1.72
LDLRAD4-209ENST00000587440 STYK1Q6J9G0 422 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms