RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ATP6V0A1Q93050 837 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 EMID1Q96A84 441 aaPredicted RBP8.92□□□□□ -0.98
VMP1-204ENST00000587259 ZBTB10Q96DT7 871 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 IWS1Q96ST2 819 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 YME1L1Q96TA2 773 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 KATNAL1Q9BW62 490 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 LRRC2Q9BYS8 371 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 SCAND2PQ9GZW5 306 aaPredicted RBP8.92□□□□□ -0.98
VMP1-204ENST00000587259 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 LY9Q9HBG7 655 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 SETD4Q9NVD3 440 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 RBM28Q9NW13 759 aaKnown RBP8.92□□□□□ -0.98
VMP1-204ENST00000587259 RTEL1Q9NZ71 1219 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 LMCD1Q9NZU5 365 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 CFAP45Q9UL16 551 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 INSL6Q9Y581 213 aa8.92□□□□□ -0.98
VMP1-204ENST00000587259 C5orf42Q9H799 3197 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 C17orf102A2RUQ5 167 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 KLRF2D3W0D1 207 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 DDAH1O94760 285 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 LGALS2P05162 132 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 NUDT7P0C024 238 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 HOXD8P13378 290 aaPredicted RBP8.91□□□□□ -0.98
VMP1-204ENST00000587259 SEMA3FQ13275 785 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 GPM6BQ13491 265 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 TRIM29Q14134 588 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 L1TD1Q5T7N2 865 aaKnown RBP8.91□□□□□ -0.98
VMP1-204ENST00000587259 UTP14CQ5TAP6 766 aaKnown RBP8.91□□□□□ -0.98
VMP1-204ENST00000587259 RUFY4Q6ZNE9 571 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 VSIG10LQ86VR7 867 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 TMEM192Q8IY95 271 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 BANK1Q8NDB2 785 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 NEK9Q8TD19 979 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 IGDCC4Q8TDY8 1250 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 MRPL38Q96DV4 380 aaKnown RBP8.91□□□□□ -0.98
VMP1-204ENST00000587259 PIGSQ96S52 555 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 PHOX2BQ99453 314 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
VMP1-204ENST00000587259 MLXIPQ9HAP2 919 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 CLDND1Q9NY35 253 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 MAD2L2Q9UI95 211 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 PNMA2Q9UL42 364 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 PCDHA1Q9Y5I3 950 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 MICAL3Q7RTP6 2002 aa8.91□□□□□ -0.98
VMP1-204ENST00000587259 WDFY4Q6ZS81 3184 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 DOCK5Q9H7D0 1870 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 GOLGA8AA7E2F4 631 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 H3BRB1 525 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 GRM6O15303 877 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 LINC01565O15544 149 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 PPFIA4O75335 1185 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 XBP1P17861 261 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 UBE2HP62256 183 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 CCT2P78371 535 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 MRPS9P82933 396 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 RTN1Q16799 776 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 IFIT1BQ5T764 474 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 CYFIP1Q7L576 1253 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 BRAPQ7Z569 592 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 CATIPQ7Z7H3 387 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 ZNF687Q8N1G0 1237 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 TOP1MTQ969P6 601 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 AMNQ9BXJ7 453 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 IFIH1Q9BYX4 1025 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 LMBRD1Q9NUN5 540 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
VMP1-204ENST00000587259 BAZ2BQ9UIF8 2168 aaKnown RBP8.9□□□□□ -0.98
VMP1-204ENST00000587259 ATG2AQ2TAZ0 1938 aa8.9□□□□□ -0.99
VMP1-204ENST00000587259 PRR33A8MZF0 331 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 H3BNC9 293 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ZBTB5O15062 677 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 CYTH3O43739 400 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 EFCAB14O75071 495 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 PARNO95453 639 aaKnown RBP8.89□□□□□ -0.99
VMP1-204ENST00000587259 CHRNA1P02708 482 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 LINC00271P0C7V0 271 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 GHRP10912 638 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 IBSPP21815 317 aaPredicted RBP8.89□□□□□ -0.99
VMP1-204ENST00000587259 CCND2P30279 289 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 HOXC8P31273 242 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 KIF5BP33176 963 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 CTNNB1P35222 781 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 LTBRP36941 435 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ARHGAP4P98171 946 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ZP2Q05996 745 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 HYAL1Q12794 435 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 SEC23AQ15436 765 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 HFE2Q6ZVN8 426 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ZNF654Q8IZM8 581 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 SEPT8Q92599 483 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 MTMR8Q96EF0 704 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 C8orf76Q96K31 380 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 FBXL18Q96ME1 805 aa8.89□□□□□ -0.99
VMP1-204ENST00000587259 ZNF396Q96N95 335 aaPredicted RBP8.89□□□□□ -0.99
VMP1-204ENST00000587259 MAP3K14Q99558 947 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms