RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 AXIN1O15169 862 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 EDIL3O43854 480 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PPFIA4O75335 1185 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PDCP20941 246 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PTGS1P23219 599 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PURAQ00577 322 aaKnown RBP9.09□□□□□ -0.95
SMAD4-204ENST00000586253 BEX3Q00994 111 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 NR5A1Q13285 461 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 INF2Q27J81 1249 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 Q4G0T1 1027 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PPP4R3AQ6IN85 833 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 PIK3AP1Q6ZUJ8 805 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 AFG1LQ8WV93 481 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 LENG9Q96B70 501 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 SPATA33Q96N06 139 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 SDF4Q9BRK5 362 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 JPH1Q9HDC5 661 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-204ENST00000586253 STARD7Q9NQZ5 370 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 SCN10AQ9Y5Y9 1956 aa9.09□□□□□ -0.95
SMAD4-204ENST00000586253 IPO5O00410 1097 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 NOP56O00567 594 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 ATP9AO75110 1047 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 ARP10275 920 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 U2AF2P26368 475 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 TRAPPC10P48553 1259 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 GUCY1B3Q02153 619 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 GNL2Q13823 731 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 HSDL1Q3SXM5 330 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 PRR16Q569H4 304 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 EARS2Q5JPH6 523 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 LARP1BQ659C4 914 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 CXCL17Q6UXB2 119 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 SLC39A5Q6ZMH5 540 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 NOSTRINQ8IVI9 506 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 HLA-CQ95604 372 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 GPR20Q99678 358 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 ZNF577Q9BSK1 485 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 MTG1Q9BT17 334 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 KATNAL1Q9BW62 490 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 TBC1D22BQ9NU19 505 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 SLC9A2Q9UBY0 812 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 DDX25Q9UHL0 483 aaKnown RBP9.08□□□□□ -0.96
SMAD4-204ENST00000586253 DOCK5Q9H7D0 1870 aa9.08□□□□□ -0.96
SMAD4-204ENST00000586253 MROH7Q68CQ1 1323 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 A0A0U1RQG5 324 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 H3BQV1 296 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 TBX3O15119 743 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 MSH4O15457 936 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 DHX15O43143 795 aaKnown RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 CCNT1O60563 726 aaKnown RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 TDP2O95551 362 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 F2P00734 622 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 MYL3P08590 195 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 PDIA4P13667 645 aaKnown RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 ITGB3BPQ13352 177 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 ORC2Q13416 577 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 ZNF746Q6NUN9 644 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-204ENST00000586253 SLC43A3Q8NBI5 491 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 SLC5A5Q92911 643 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 TOX2Q96NM4 488 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 RIT2Q99578 217 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 ALPK3Q96L96 1907 aa9.07□□□□□ -0.96
SMAD4-204ENST00000586253 KIF28PB7ZC32 967 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 J3QL48 77 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ARVCFO00192 962 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 HAS3O00219 553 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 SLC37A4O43826 429 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 TRAK2O60296 914 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ATG7O95352 703 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 LGALS2P05162 132 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 CDK7P50613 346 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 KRT76Q01546 638 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ITGA7Q13683 1181 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 LRRC26Q2I0M4 334 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 NFRKBQ6P4R8 1299 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 SESTD1Q86VW0 696 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 SMAP1Q8IYB5 467 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-204ENST00000586253 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 KAT2BQ92831 832 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 VTI1AQ96AJ9 217 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 MRGPRX2Q96LB1 330 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 FAM20AQ96MK3 541 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 C16orf70Q9BSU1 422 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 BCAS3Q9H6U6 928 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 KCNMB3Q9NPA1 279 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
SMAD4-204ENST00000586253 ZNF215Q9UL58 517 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-204ENST00000586253 NOL7Q9UMY1 257 aaKnown RBP9.06□□□□□ -0.96
SMAD4-204ENST00000586253 GRIN2DO15399 1336 aa9.05□□□□□ -0.96
SMAD4-204ENST00000586253 EMSYQ7Z589 1322 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms