RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 CCDC40Q4G0X9 1142 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 ZNF746Q6NUN9 644 aaPredicted RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 LBX2Q6XYB7 198 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 PRRT2Q7Z6L0 340 aaPredicted RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 NELFCDQ8IXH7 590 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 DNERQ8NFT8 737 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 DNAJC7Q99615 494 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 A1CFQ9NQ94 594 aaKnown RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 SAMM50Q9Y512 469 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 KIAA1217Q5T5P2 1943 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 TTC26A0AVF1 554 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 SPDYE5A6NIY4 337 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 DDX39AO00148 427 aaKnown RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 ZBED6P86452 979 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 PLS1Q14651 629 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 C4orf19Q8IY42 314 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 BANK1Q8NDB2 785 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 EEF2KMTQ96G04 330 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 EDEM3Q9BZQ6 932 aa15.67■□□□□ 0.1
LIG3-205ENST00000585941 TYW1Q9NV66 732 aaKnown RBP15.67■□□□□ 0.1
LIG3-205ENST00000585941 NFASCO94856 1347 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 GLTPD2A6NH11 291 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 GCNT3O95395 438 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 GTF2F1P35269 517 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIG3-205ENST00000585941 PSMC5P62195 406 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 PPIL2Q13356 520 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 ADAM9Q13443 819 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 ALCAMQ13740 583 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 NFIL3Q16649 462 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 ARMC9Q7Z3E5 817 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 RIOX2Q8IUF8 465 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
LIG3-205ENST00000585941 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
LIG3-205ENST00000585941 FGFBP2Q9BYJ0 223 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 TTYH3Q9C0H2 523 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 ZNHIT6Q9NWK9 470 aaKnown RBP15.66■□□□□ 0.1
LIG3-205ENST00000585941 PKD2L1Q9P0L9 805 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
LIG3-205ENST00000585941 KCNH4Q9UQ05 1017 aa15.66■□□□□ 0.1
LIG3-205ENST00000585941 UQCRHLA0A096LP55 91 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 RSPH10B2B2RC85 870 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 UQCRHP07919 91 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 RSPH10BP0C881 870 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
LIG3-205ENST00000585941 COPB2P35606 906 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 ETF1P62495 437 aaKnown RBP15.65■□□□□ 0.1
LIG3-205ENST00000585941 IRX3P78415 501 aaPredicted RBP15.65■□□□□ 0.1
LIG3-205ENST00000585941 TREML2Q5T2D2 321 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 GADL1Q6ZQY3 521 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 PNMA8AQ86V59 439 aaPredicted RBP15.65■□□□□ 0.1
LIG3-205ENST00000585941 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 CCDC43Q96MW1 224 aaKnown RBP15.65■□□□□ 0.1
LIG3-205ENST00000585941 ELP3Q9H9T3 547 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 ANKEF1Q9NU02 776 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 PCDHB13Q9Y5F0 798 aa15.65■□□□□ 0.1
LIG3-205ENST00000585941 SOWAHDA6NJG2 315 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 UNCXA6NJT0 531 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 IRF6O14896 467 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 GRIN3BO60391 1043 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 MYBP10242 640 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 NR2F2P24468 414 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 CASP5P51878 434 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 TTLL12Q14166 644 aaPredicted RBP15.64■□□□□ 0.09
LIG3-205ENST00000585941 PADI6Q6TGC4 694 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 TOGARAM2Q6ZUX3 1019 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 FAM178BQ8IXR5 827 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 GOLGA5Q8TBA6 731 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 ZNF592Q92610 1267 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 OTUD5Q96G74 571 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 MOV10L1Q9BXT6 1211 aaKnown RBP15.64■□□□□ 0.09
LIG3-205ENST00000585941 METTL14Q9HCE5 456 aaKnown RBP15.64■□□□□ 0.09
LIG3-205ENST00000585941 SIK3Q9Y2K2 1263 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIG3-205ENST00000585941 ADGRG1Q9Y653 693 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 WDR81Q562E7 1941 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 PHLPP2Q6ZVD8 1323 aa15.64■□□□□ 0.09
LIG3-205ENST00000585941 DYNC1I1O14576 645 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 SLC16A3O15427 465 aaKnown RBP15.63■□□□□ 0.09
LIG3-205ENST00000585941 RARRES1P49788 294 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 CDK17Q00537 523 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 STXBP2Q15833 593 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 MEA1Q16626 185 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 FASTKD5Q7L8L6 764 aaKnown RBP15.63■□□□□ 0.09
LIG3-205ENST00000585941 ANKRD35Q8N283 1001 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 SLC17A8Q8NDX2 589 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 LARSQ9P2J5 1176 aaKnown RBP15.63■□□□□ 0.09
LIG3-205ENST00000585941 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 LCTP09848 1927 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 ZBTB39O15060 712 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 ATP9AO75110 1047 aa15.63■□□□□ 0.09
LIG3-205ENST00000585941 EIF3JO75822 258 aaKnown RBP15.63■□□□□ 0.09
LIG3-205ENST00000585941 PRPF6O94906 941 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms