RNA–Protein interactions for RNA: ENST00000585595.5

MBD1-211, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-211ENST00000585595 LRRC53A6NM62 1247 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 EFCAB8A8MWE9 144 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
MBD1-211ENST00000585595 TADA3O75528 432 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
MBD1-211ENST00000585595 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 KCNA1Q09470 495 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 ITGB3BPQ13352 177 aaPredicted RBP16.9■□□□□ 0.3
MBD1-211ENST00000585595 PGM5Q15124 567 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 CACNA2D4Q7Z3S7 1137 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 BAP1Q92560 729 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 UBXN4Q92575 508 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 TFR2Q9UP52 801 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 RLFQ13129 1914 aa16.9■□□□□ 0.3
MBD1-211ENST00000585595 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.3
MBD1-211ENST00000585595 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.3
MBD1-211ENST00000585595 HMGCS2P54868 508 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 MTMR1Q13613 665 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 ZNF662Q6ZS27 426 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 ARID3AQ99856 593 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.3
MBD1-211ENST00000585595 GGA3Q9NZ52 723 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 KCND2Q9NZV8 630 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 RIPK3Q9Y572 518 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 ASTN1O14525 1302 aa16.89■□□□□ 0.3
MBD1-211ENST00000585595 ARHGEF35A5YM69 484 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 EIF3DO15371 548 aaKnown RBP eCLIP16.89■□□□□ 0.29
MBD1-211ENST00000585595 NR3C1P04150 777 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 MYCLP12524 364 aaPredicted RBP16.89■□□□□ 0.29
MBD1-211ENST00000585595 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 CCDC122Q5T0U0 273 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 PDXDC1Q6P996 788 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 RMDN3Q96TC7 470 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 NAPGQ99747 312 aaPredicted RBP16.89■□□□□ 0.29
MBD1-211ENST00000585595 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.29
MBD1-211ENST00000585595 ARMCX3Q9UH62 379 aaPredicted RBP16.89■□□□□ 0.29
MBD1-211ENST00000585595 NOL4O94818 638 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 P4HBP07237 508 aaKnown RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 RPL13P26373 211 aaKnown RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 EPS15P42566 896 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 ZNF131P52739 623 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 JAKMIP2Q96AA8 810 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 PURBQ96QR8 312 aaKnown RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 NLRC4Q9NPP4 1024 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 PXMP2Q9NR77 195 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 RNF146Q9NTX7 359 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 CEP72Q9P209 647 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 SEL1LQ9UBV2 794 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 ODF2LQ9ULJ1 636 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 C19orf81C9J6K1 198 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 CLIC2O15247 247 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 TGFB1I1O43294 461 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 HIRAP54198 1017 aaPredicted RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
MBD1-211ENST00000585595 ARHGEF16Q5VV41 709 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 GPC2Q8N158 579 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 PDCD2LQ9BRP1 358 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 CDC23Q9UJX2 597 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 SAMM50Q9Y512 469 aa16.88■□□□□ 0.29
MBD1-211ENST00000585595 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 KRT86O43790 486 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 AKAP3O75969 853 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 DSG3P32926 999 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 EIF4A3P38919 411 aaKnown RBP16.87■□□□□ 0.29
MBD1-211ENST00000585595 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
MBD1-211ENST00000585595 SPA17Q15506 151 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 FBXO38Q6PIJ6 1188 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 ZNF720Q7Z2F6 126 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 FIZ1Q96SL8 496 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 ZNF263O14978 683 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 SNRNP48Q6IEG0 339 aaKnown RBP16.87■□□□□ 0.29
MBD1-211ENST00000585595 PADI6Q6TGC4 694 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 CCDC94Q9BW85 323 aaPredicted RBP16.87■□□□□ 0.29
MBD1-211ENST00000585595 LACRTQ9GZZ8 138 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 DEF6Q9H4E7 631 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 PPP2R3BQ9Y5P8 575 aa16.87■□□□□ 0.29
MBD1-211ENST00000585595 SLC16A3O15427 465 aaKnown RBP16.86■□□□□ 0.29
MBD1-211ENST00000585595 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
MBD1-211ENST00000585595 LMNB1P20700 586 aa16.86■□□□□ 0.29
MBD1-211ENST00000585595 CASP4P49662 377 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms