RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 HOXC10Q9NYD6 342 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 NAGPAQ9UK23 515 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 FEM1BQ9UK73 627 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 ZNF214Q9UL59 606 aaPredicted RBP6.56□□□□□ -1.36
CDH8-213ENST00000584966 RABGAP1Q9Y3P9 1069 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 RIPK3Q9Y572 518 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 CYP46A1Q9Y6A2 500 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 MYH7BA7E2Y1 1941 aa6.56□□□□□ -1.36
CDH8-213ENST00000584966 WDR81Q562E7 1941 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 ERICH2A1L162 156 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 ATP2A1O14983 1001 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 DDAH1O94760 285 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 RXRAP19793 462 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 PDIA3P30101 505 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 CDC27P30260 824 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 STAT2P52630 851 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 LBX1P52954 281 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 AK2P54819 239 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 SNAP25P60880 206 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 PSMA6P60900 246 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 ERVK-24P63145 666 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 IRX3P78415 501 aaPredicted RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 SP3Q02447 781 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 SART3Q15020 963 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 NTRK3Q16288 839 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 FAM110CQ1W6H9 321 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 ASPRV1Q53RT3 343 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 COX20Q5RI15 118 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 GPATCH4Q5T3I0 446 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 TMC7Q7Z402 723 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 FAM160B2Q86V87 743 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 RAB11FIP4Q86YS3 637 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 SRBD1Q8N5C6 995 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 ANKRD13CQ8N6S4 541 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 FANCBQ8NB91 859 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 CHURC1Q8WUH1 139 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 BRF1Q92994 677 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 SLF1Q9BQI6 1058 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 PORCNQ9H237 461 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 RANBP17Q9H2T7 1088 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 RIOX1Q9H6W3 641 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 JMJD4Q9H9V9 463 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH8-213ENST00000584966 PDRG1Q9NUG6 133 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 DNAJB12Q9NXW2 375 aaKnown RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 GJD2Q9UKL4 321 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 TPCN1Q9ULQ1 816 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 GPC6Q9Y625 555 aaPredicted RBP6.55□□□□□ -1.36
CDH8-213ENST00000584966 LRRC37A2A6NM11 1700 aa6.55□□□□□ -1.36
CDH8-213ENST00000584966 MKI67P46013 3256 aaKnown RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 KLF18A0A0U1RQI7 1052 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CCDC69A6NI79 296 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 KLRF2D3W0D1 207 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 PPP1R11O60927 126 aaPredicted RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 FKTNO75072 461 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 PLEKHA8P1O95397 391 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 LARGE1O95461 756 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 PARP1P09874 1014 aaKnown RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 SMARCA1P28370 1054 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CTCFP49711 727 aaPredicted RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 NEK4P51957 841 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 RCAN1P53805 252 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 LACTBP83111 547 aaPredicted RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 ST3GAL1Q11201 340 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CATIPQ7Z7H3 387 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 RIOX2Q8IUF8 465 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CCDC144CPQ8IYA2 1237 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 ADGRF4Q8IZF3 695 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CMTR1Q8N1G2 835 aaKnown RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 GPRC5AQ8NFJ5 357 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 CD99L2Q8TCZ2 262 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 USP6NLQ92738 828 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 ZNF274Q96GC6 653 aaPredicted RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 MYO19Q96H55 970 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 MOV10L1Q9BXT6 1211 aaKnown RBP6.54□□□□□ -1.36
CDH8-213ENST00000584966 SPATC1LQ9H0A9 340 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 SLC12A7Q9Y666 1083 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 FRMPD3Q5JV73 1810 aa6.54□□□□□ -1.36
CDH8-213ENST00000584966 DOCK5Q9H7D0 1870 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 KIAA1324LA8MWY0 1029 aaPredicted RBP6.53□□□□□ -1.36
CDH8-213ENST00000584966 ZBTB43O43298 467 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 NDUFB5O43674 189 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 TGFB1P01137 390 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 IGHA2P01877 340 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CALM1P0DP23 149 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CALM2P0DP24 149 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CALM3P0DP25 149 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 STAT3P40763 770 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 EIF1AXP47813 144 aaKnown RBP6.53□□□□□ -1.36
CDH8-213ENST00000584966 OAZ1P54368 228 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 TYRO3Q06418 890 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 ME3Q16798 604 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CCDC96Q2M329 555 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 IGF2-ASQ6U949 168 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 NFXL1Q6ZNB6 911 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms