RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 P4HBP07237 508 aaKnown RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 CLTBP09497 229 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 TXLNAP40222 546 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 QARSP47897 775 aaKnown RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 IGBP1P78318 339 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 KRT85P78386 507 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 CYP4A11Q02928 519 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 EPHA7Q15375 998 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 ZRSR1Q15695 479 aaKnown RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 ZNF697Q5TEC3 545 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 OTUD6AQ7L8S5 288 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 CCDC60Q8IWA6 550 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 ZSWIM4Q9H7M6 989 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-215ENST00000584944 CLIC4Q9Y696 253 aa15.54■□□□□ 0.08
TRAF4-215ENST00000584944 NRCAMQ92823 1304 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 RRN3P2A6NIE6 340 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 DDX11L8A8MPP1 907 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 KIAA0355O15063 1070 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 SMIM10L2AP0DMW4 78 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 SMIM10L2BP0DMW5 78 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 CCT6AP40227 531 aaKnown RBP15.53■□□□□ 0.08
TRAF4-215ENST00000584944 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRAF4-215ENST00000584944 PRKCEQ02156 737 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 PDIA5Q14554 519 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 PTGISQ16647 500 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 CCDC155Q8N6L0 562 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 ATP8B4Q8TF62 1192 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 BBXQ8WY36 941 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-215ENST00000584944 KAT2BQ92831 832 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
TRAF4-215ENST00000584944 LXNQ9BS40 222 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 TMEM39AQ9NV64 488 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 HDAC6Q9UBN7 1215 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-215ENST00000584944 TELO2Q9Y4R8 837 aa15.53■□□□□ 0.08
TRAF4-215ENST00000584944 HBP1O60381 514 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 OATP04181 439 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 MARCKSP29966 332 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-215ENST00000584944 UBA7P41226 1012 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 ME1P48163 572 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 SMAD3P84022 425 aaKnown RBP15.52■□□□□ 0.08
TRAF4-215ENST00000584944 FAAP100Q0VG06 881 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 ANKRD33Q7Z3H0 272 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 SNX29Q8TEQ0 813 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 DYDC2Q96IM9 177 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 AK8Q96MA6 479 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 TOX2Q96NM4 488 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 USP28Q96RU2 1077 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRAF4-215ENST00000584944 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 RNPEPQ9H4A4 650 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 SETD4Q9NVD3 440 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
TRAF4-215ENST00000584944 MAFBQ9Y5Q3 323 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-215ENST00000584944 DOCK5Q9H7D0 1870 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 IGKV6D-21A0A0A0MT36 114 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 HAS3O00219 553 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 EML1O00423 815 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 SPTLC2O15270 562 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 YEATS4O95619 227 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 RAG1P15918 1043 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 LONP1P36776 959 aaKnown RBP15.51■□□□□ 0.07
TRAF4-215ENST00000584944 EPHB4P54760 987 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 DNM1Q05193 864 aaKnown RBP15.51■□□□□ 0.07
TRAF4-215ENST00000584944 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
TRAF4-215ENST00000584944 SLC39A14Q15043 492 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 PLCB4Q15147 1175 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 GRIK4Q16099 956 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 ZNF484Q5JVG2 852 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 RSPH3Q86UC2 560 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 C4orf32Q8N8J7 132 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 KRI1Q8N9T8 703 aaKnown RBP15.51■□□□□ 0.07
TRAF4-215ENST00000584944 PPP1R13LQ8WUF5 828 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 CALML4Q96GE6 196 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 SPATA32Q96LK8 384 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 PCYT2Q99447 389 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 TRPV6Q9H1D0 765 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 TRMT13Q9NUP7 481 aaKnown RBP15.51■□□□□ 0.07
TRAF4-215ENST00000584944 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 GTF2IRD1Q9UHL9 959 aa15.51■□□□□ 0.07
TRAF4-215ENST00000584944 CDH23Q9H251 3354 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 KDM3AQ9Y4C1 1321 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 INSRRP14616 1297 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 SPIRE1Q08AE8 756 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 BFSP2Q13515 415 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 SESTD1Q86VW0 696 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 EXOC8Q8IYI6 725 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 METTL13Q8N6R0 699 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 RETREG2Q8NC44 543 aa15.5■□□□□ 0.07
TRAF4-215ENST00000584944 CDX2Q99626 313 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-215ENST00000584944 SCAND2PQ9GZW5 306 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-215ENST00000584944 TUFT1Q9NNX1 390 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms