RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MBTPS1Q14703 1052 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 FAM26DQ5JW98 314 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 POTEDQ86YR6 584 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.53
ERBB2-222ENST00000584908 GABBR1Q9UBS5 961 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 SAMM50Q9Y512 469 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.53
ERBB2-222ENST00000584908 CHD9Q3L8U1 2897 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 RSPH10B2B2RC85 870 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 ZBTB42B2RXF5 422 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 ZNF862O60290 1169 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 RSPH10BP0C881 870 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
ERBB2-222ENST00000584908 SPIRE1Q08AE8 756 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 ORC2Q13416 577 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-222ENST00000584908 ZNF484Q5JVG2 852 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 RUFY4Q6ZNE9 571 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 MIER3Q7Z3K6 550 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 DEFB128Q7Z7B8 93 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 SLFN12Q8IYM2 578 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 LRCH3Q96II8 777 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 FAM167AQ96KS9 214 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 MTIF3Q9H2K0 278 aaKnown RBP18.32■□□□□ 0.52
ERBB2-222ENST00000584908 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
ERBB2-222ENST00000584908 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
ERBB2-222ENST00000584908 CHMP2AO43633 222 aa18.31■□□□□ 0.52
ERBB2-222ENST00000584908 GJB2P29033 226 aa18.31■□□□□ 0.52
ERBB2-222ENST00000584908 TRAPPC10P48553 1259 aa18.31■□□□□ 0.52
ERBB2-222ENST00000584908 MTMR9Q96QG7 549 aa18.31■□□□□ 0.52
ERBB2-222ENST00000584908 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-222ENST00000584908 LOXHD1Q8IVV2 1947 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
ERBB2-222ENST00000584908 SMIM35A0A1B0GVV1 85 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
ERBB2-222ENST00000584908 NEMFO60524 1076 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 BAIAP3O94812 1187 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
ERBB2-222ENST00000584908 ACTN1P12814 892 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 IGBP1P78318 339 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 UGCGQ16739 394 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 MTHFD1LQ6UB35 978 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 TRAPPC12Q8WVT3 735 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 GBF1Q92538 1859 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 PTPRSQ13332 1948 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
ERBB2-222ENST00000584908 EML1O00423 815 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 OATP04181 439 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 PRKCEQ02156 737 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 MGAT3Q09327 533 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 CNKSR3Q6P9H4 555 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 CKAP2LQ8IYA6 745 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 CEP131Q9UPN4 1083 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 SMC3Q9UQE7 1217 aa18.29■□□□□ 0.52
ERBB2-222ENST00000584908 STBD1O95210 358 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 C22orf31O95567 290 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 CHRNA1P02708 482 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 KLRC1P26715 233 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-222ENST00000584908 CALCRLQ16602 461 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-222ENST00000584908 NME8Q8N427 588 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 DNAJB3Q8WWF6 145 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 ZBTB10Q96DT7 871 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
ERBB2-222ENST00000584908 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
ERBB2-222ENST00000584908 P4HBP07237 508 aaKnown RBP18.27■□□□□ 0.52
ERBB2-222ENST00000584908 PSMC5P62195 406 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 GNL2Q13823 731 aaKnown RBP18.27■□□□□ 0.52
ERBB2-222ENST00000584908 EPHA7Q15375 998 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 TARBP2Q15633 366 aaKnown RBP18.27■□□□□ 0.52
ERBB2-222ENST00000584908 PLEKHG4Q58EX7 1191 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 XKR3Q5GH77 459 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 SNX21Q969T3 373 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 INTS4Q96HW7 963 aaKnown RBP18.27■□□□□ 0.52
ERBB2-222ENST00000584908 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.52
ERBB2-222ENST00000584908 PCDHA12Q9UN75 941 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 SLC4A7Q9Y6M7 1214 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
ERBB2-222ENST00000584908 ABHD14A-ACY1A0A1B0GW23 586 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 MAGEB2O15479 319 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 MARCH6O60337 910 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 EFCAB14O75071 495 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 CTSHP09668 335 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 MCM7P33993 719 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 QARSP47897 775 aaKnown RBP18.26■□□□□ 0.51
ERBB2-222ENST00000584908 MRPS6P82932 125 aaKnown RBP18.26■□□□□ 0.51
ERBB2-222ENST00000584908 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 TTC38Q5R3I4 469 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 LINC01465Q8N7H1 131 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 PHOSPHO2Q8TCD6 241 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
ERBB2-222ENST00000584908 TTC12Q9H892 705 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-222ENST00000584908 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
ERBB2-222ENST00000584908 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms