RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 CCNE2O96020 404 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 CHRNA1P02708 482 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 BMP1P13497 986 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
ERBB2-221ENST00000584888 HTRA4P83105 476 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-221ENST00000584888 ST3GAL1Q11201 340 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 PPFIA1Q13136 1202 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 AAK1Q2M2I8 961 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 TAF2Q6P1X5 1199 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 RUFY4Q6ZNE9 571 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 RPAINQ86UA6 219 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 UHRF1Q96T88 793 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-221ENST00000584888 LMCD1Q9NZU5 365 aa20.25■□□□□ 0.83
ERBB2-221ENST00000584888 IPO5O00410 1097 aaKnown RBP20.24■□□□□ 0.83
ERBB2-221ENST00000584888 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-221ENST00000584888 GRIK4Q16099 956 aa20.24■□□□□ 0.83
ERBB2-221ENST00000584888 ABHD15Q6UXT9 468 aa20.24■□□□□ 0.83
ERBB2-221ENST00000584888 TOP1MTQ969P6 601 aa20.24■□□□□ 0.83
ERBB2-221ENST00000584888 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
ERBB2-221ENST00000584888 ORC3Q9UBD5 711 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-221ENST00000584888 KCNJ14Q9UNX9 436 aa20.24■□□□□ 0.83
ERBB2-221ENST00000584888 CYP3A7-CYP3A51PA0A087WV96 503 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 MBLAC1A4D2B0 266 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 CYP3A7P24462 503 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 KCNQ1P51787 676 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 MARCH8Q5T0T0 291 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 MICAL3Q7RTP6 2002 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 NSUN7Q8NE18 718 aaKnown RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 SP7Q8TDD2 431 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 TBCKQ8TEA7 893 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 APBB2Q92870 758 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 MBOAT7Q96N66 472 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 C17orf80Q9BSJ5 609 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 IFIH1Q9BYX4 1025 aaKnown RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 COG5Q9UP83 839 aa20.23■□□□□ 0.83
ERBB2-221ENST00000584888 MYH9P35579 1960 aaKnown RBP20.23■□□□□ 0.83
ERBB2-221ENST00000584888 UPP2O95045 317 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 PRR16Q569H4 304 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 RSPH3Q86UC2 560 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 DNAJB3Q8WWF6 145 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 HLA-CQ95604 372 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 YME1L1Q96TA2 773 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 ZNF577Q9BSK1 485 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 TBC1D22BQ9NU19 505 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 TRANK1O15050 2925 aa20.22■□□□□ 0.83
ERBB2-221ENST00000584888 GHRP10912 638 aa20.21■□□□□ 0.83
ERBB2-221ENST00000584888 MGAT3Q09327 533 aa20.21■□□□□ 0.83
ERBB2-221ENST00000584888 Q4G0T1 1027 aa20.21■□□□□ 0.83
ERBB2-221ENST00000584888 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
ERBB2-221ENST00000584888 NECAB3Q96P71 396 aaPredicted RBP20.21■□□□□ 0.83
ERBB2-221ENST00000584888 AZI2Q9H6S1 392 aa20.21■□□□□ 0.83
ERBB2-221ENST00000584888 NCOR1O75376 2440 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 RRN3P2A6NIE6 340 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 MSH4O15457 936 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 INSRRP14616 1297 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 STAT5BP51692 787 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 IGBP1P78318 339 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 PLCB4Q15147 1175 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 ZNF746Q6NUN9 644 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-221ENST00000584888 MOXD1Q6UVY6 613 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 KRT25Q7Z3Z0 450 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 WASF1Q92558 559 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 SLC5A5Q92911 643 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 ZBTB10Q96DT7 871 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 UIMC1Q96RL1 719 aa20.2■□□□□ 0.82
ERBB2-221ENST00000584888 COL4A4P53420 1690 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-221ENST00000584888 TCF20Q9UGU0 1960 aaKnown RBP20.19■□□□□ 0.82
ERBB2-221ENST00000584888 DDX39AO00148 427 aaKnown RBP20.19■□□□□ 0.82
ERBB2-221ENST00000584888 JAK2O60674 1132 aa20.19■□□□□ 0.82
ERBB2-221ENST00000584888 XBP1P17861 261 aa20.19■□□□□ 0.82
ERBB2-221ENST00000584888 LPIN1Q14693 890 aa20.19■□□□□ 0.82
ERBB2-221ENST00000584888 NONOQ15233 471 aaKnown RBP eCLIP20.19■□□□□ 0.82
ERBB2-221ENST00000584888 OXER1Q8TDS5 423 aa20.19■□□□□ 0.82
ERBB2-221ENST00000584888 CDY2AQ9Y6F7 541 aa20.19■□□□□ 0.82
ERBB2-221ENST00000584888 ATP4AP20648 1035 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 SLC26A2P50443 739 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 KRT76Q01546 638 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 EPC2Q52LR7 807 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 CCDC60Q8IWA6 550 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-221ENST00000584888 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
ERBB2-221ENST00000584888 TNFRSF25Q93038 417 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 SAMD11Q96NU1 681 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 RIT2Q99578 217 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 TRPC6Q9Y210 931 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 REV3LO60673 3130 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 SIP14410 1827 aa20.18■□□□□ 0.82
ERBB2-221ENST00000584888 ENPP3O14638 875 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 TDP2O95551 362 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 MRPS6P82932 125 aaKnown RBP20.17■□□□□ 0.82
ERBB2-221ENST00000584888 INF2Q27J81 1249 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 FBXO47Q5MNV8 452 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 MIS18BP1Q6P0N0 1132 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 B3GNT9Q6UX72 402 aa20.17■□□□□ 0.82
ERBB2-221ENST00000584888 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
ERBB2-221ENST00000584888 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms