RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 DNM3Q9UQ16 869 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 KAT6AQ92794 2004 aa20.48■□□□□ 0.87
RFFL-211ENST00000584541 KBTBD13C9JR72 458 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 H3BRB1 525 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
RFFL-211ENST00000584541 GJB1P08034 283 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 NDUFA8P51970 172 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 IRX5P78411 483 aaPredicted RBP20.47■□□□□ 0.87
RFFL-211ENST00000584541 PRKCEQ02156 737 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 FAM160A1Q05DH4 1040 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 TMEM119Q4V9L6 283 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 OTUD6AQ7L8S5 288 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 TRIM50Q86XT4 487 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 C16orf70Q9BSU1 422 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 TSEN34Q9BSV6 310 aaKnown RBP20.47■□□□□ 0.87
RFFL-211ENST00000584541 MTG1Q9BT17 334 aaPredicted RBP20.47■□□□□ 0.87
RFFL-211ENST00000584541 TMEM106CQ9BVX2 250 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 GOLPH3LQ9H4A5 285 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 TUT1Q9H6E5 874 aaKnown RBP20.47■□□□□ 0.87
RFFL-211ENST00000584541 NRBP2Q9NSY0 501 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 STK17AQ9UEE5 414 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 USP25Q9UHP3 1055 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 ARID2Q68CP9 1835 aa20.47■□□□□ 0.87
RFFL-211ENST00000584541 MBD3O95983 291 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 OATP04181 439 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
RFFL-211ENST00000584541 PURAQ00577 322 aaKnown RBP20.46■□□□□ 0.87
RFFL-211ENST00000584541 KCNA10Q16322 511 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 ECM1Q16610 540 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 XKR3Q5GH77 459 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 DHX58Q96C10 678 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 CCDC34Q96HJ3 373 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 CUEDC2Q9H467 287 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 OGDHLQ9ULD0 1010 aa20.46■□□□□ 0.87
RFFL-211ENST00000584541 MOXD2PA6NHM9 499 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 ZNF862O60290 1169 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 CABYRO75952 493 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 SGPL1O95470 568 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 F2P00734 622 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 TFRCP02786 760 aaKnown RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 ASGR1P07306 291 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 CAPN2P17655 700 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 MARK3P27448 753 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 YWHABP31946 246 aaKnown RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 CEP57L1Q8IYX8 460 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 U2AF1L4Q8WU68 220 aaKnown RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 BBXQ8WY36 941 aaPredicted RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 ANKEF1Q9NU02 776 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 SEPT9Q9UHD8 586 aaPredicted RBP20.45■□□□□ 0.86
RFFL-211ENST00000584541 TRPC6Q9Y210 931 aa20.45■□□□□ 0.86
RFFL-211ENST00000584541 A0A087X0B3 334 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 DNM1LO00429 736 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 HBP1O60381 514 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
RFFL-211ENST00000584541 ZNF202O95125 648 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 EYA4O95677 639 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 LIG1P18858 919 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 PSEN2P49810 448 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 MFSD10Q14728 455 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 PLCB4Q15147 1175 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 CCSAPQ6IQ19 270 aaPredicted RBP20.44■□□□□ 0.86
RFFL-211ENST00000584541 CXCL17Q6UXB2 119 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 PIGOQ8TEQ8 1089 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 ATP8B4Q8TF62 1192 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 MAGEF1Q9HAY2 307 aa20.44■□□□□ 0.86
RFFL-211ENST00000584541 DBR1Q9UK59 544 aaKnown RBP20.44■□□□□ 0.86
RFFL-211ENST00000584541 E9PMD0 336 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 ATP4AP20648 1035 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 ACLYP53396 1101 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 CHMP4BP1P59074 171 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 KIAA0753Q2KHM9 967 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 FMR1NBQ8N0W7 255 aaPredicted RBP20.43■□□□□ 0.86
RFFL-211ENST00000584541 ENGASEQ8NFI3 743 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 LARP4BQ92615 738 aaKnown RBP20.43■□□□□ 0.86
RFFL-211ENST00000584541 RAD54LQ92698 747 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 GLT1D1Q96MS3 346 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 CRISPLD2Q9H0B8 497 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 SCN10AQ9Y5Y9 1956 aa20.43■□□□□ 0.86
RFFL-211ENST00000584541 HTTP42858 3142 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 NR1I2O75469 434 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 SSBP05455 408 aaKnown RBP eCLIP20.42■□□□□ 0.86
RFFL-211ENST00000584541 SLFN14P0C7P3 912 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 GJA8P48165 433 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 PSMC6P62333 389 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 NFKBIBQ15653 356 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 E2F4Q16254 413 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 XKR9Q5GH70 373 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 KANK3Q6NY19 840 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 ANO5Q75V66 913 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 SV2BQ7L1I2 683 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 KCNK18Q7Z418 384 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 CNNM3Q8NE01 707 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 KAT2BQ92831 832 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 VTI1AQ96AJ9 217 aa20.42■□□□□ 0.86
RFFL-211ENST00000584541 CEP170P1Q96L14 293 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms