RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, human

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-225	ENST00000584155	SERINC3	Q13530	473 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	GRB14	Q14449	540 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	MVP	Q14764	893 aa	Known RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	TMEM132B	Q14DG7	1078 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	CDC37	Q16543	378 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	ALDH1L2	Q3SY69	923 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	TNNI3K	Q59H18	835 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	SYCP2L	Q5T4T6	812 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	MFSD14C	Q5VZR4	134 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	KRT40	Q6A162	431 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	DPP9	Q86TI2	863 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	PLEKHM2	Q8IWE5	1019 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF654	Q8IZM8	581 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	STK11IP	Q8N1F8	1099 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	ZGPAT	Q8N5A5	531 aa	Known RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	TMEM57	Q8N5G2	664 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	MAGEB6	Q8N7X4	407 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	FRAT1	Q92837	279 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	ATG4C	Q96DT6	458 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	C12orf42	Q96LP6	360 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	TTC14	Q96N46	770 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	DHX36	Q9H2U1	1008 aa	Known RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	AS3MT	Q9HBK9	375 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	VTI1B	Q9UEU0	232 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	SYNPO2	Q9UMS6	1093 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	RIPK3	Q9Y572	518 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	FPGT-TNNI3K	V9GXZ4	949 aa		4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	COL2A1	P02458	1487 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP85-225	ENST00000584155	PDS5A	Q29RF7	1337 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	UMODL1	Q5DID0	1318 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	TMEM238L	A0A1B0GVL6	79 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155		A0A1W2PNR3	127 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZBBX	A8MT70	800 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	DNM1L	O00429	736 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	TSPAN6	O43657	245 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	PRPF40A	O75400	957 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SURF6	O75683	361 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	IDH1	O75874	414 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	BPNT1	O95861	308 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SNAI1	O95863	264 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	FBXO45	P0C2W1	286 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CT47B1	P0C2W7	299 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CDC27	P30260	824 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	RABGGTB	P53611	331 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	EPHB1	P54762	984 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	TFF2	Q03403	129 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF211	Q13398	564 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	PLS1	Q14651	629 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	COG2	Q14746	738 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SNX17	Q15036	470 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	KCNA10	Q16322	511 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ABCB5	Q2M3G0	1257 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF792	Q3KQV3	632 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	TTC39A	Q5SRH9	613 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	TMEM240	Q5SV17	173 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SAMD5	Q5TGI4	173 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	KRTAP5-3	Q6L8H2	238 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CCDC70	Q6NSX1	233 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SPRED2	Q7Z698	418 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	KRT77	Q7Z794	578 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZSCAN30	Q86W11	494 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	NCAPG2	Q86XI2	1143 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF295-AS1	Q8N0V1	137 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	LSM14A	Q8ND56	463 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ATL2	Q8NHH9	583 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SSH3	Q8TE77	659 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SDR42E1	Q8WUS8	393 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SOCS4	Q8WXH5	440 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	MAML3	Q96JK9	1138 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	NUP88	Q99567	741 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	RIOK1	Q9BRS2	568 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	API5	Q9BZZ5	524 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	SPATC1L	Q9H0A9	340 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	KIAA1683	Q9H0B3	1180 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	PRDM12	Q9H4Q4	367 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	ZNF576	Q9H609	170 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	RETREG1	Q9H6L5	497 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	MARK1	Q9P0L2	795 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	PUF60	Q9UHX1	559 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	YBX2	Q9Y2T7	364 aa	Known RBP	4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	DOCK1	Q14185	1865 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	CDH23	Q9H251	3354 aa		4.23	□□□□□ -1.73
NUP85-225	ENST00000584155	GRIN2D	O15399	1336 aa		4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.22	□□□□□ -1.73
NUP85-225	ENST00000584155		A0A1W2PQ45	241 aa	Predicted RBP	4.22	□□□□□ -1.73
NUP85-225	ENST00000584155		A0A1W2PQY0	241 aa		4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	TCRBV5S4A2T	A0A5A2	114 aa		4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	MPHOSPH10	O00566	681 aa	Known RBP	4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	CTAGE5	O15320	804 aa		4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	SEPT4	O43236	478 aa		4.22	□□□□□ -1.73
NUP85-225	ENST00000584155	PRMT3	O60678	531 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms