RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
CASC3-208ENST00000583649 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 LIMD1Q9UGP4 676 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 PADI3Q9ULW8 664 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 TRPV2Q9Y5S1 764 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 ZMYM6O95789 1325 aa12.85□□□□□ -0.35
CASC3-208ENST00000583649 TTC3P53804 2025 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 DCHS1Q96JQ0 3298 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 SPATA31C2B4DYI2 1134 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 FSCN2O14926 492 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 ZBTB5O15062 677 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 HOXA2O43364 376 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
CASC3-208ENST00000583649 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
CASC3-208ENST00000583649 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 SP4Q02446 784 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 KCNC3Q14003 757 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
CASC3-208ENST00000583649 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 CRIPAKQ8N1N5 446 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 NME8Q8N427 588 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 COLGALT1Q8NBJ5 622 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 POMKQ9H5K3 350 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 CYP26B1Q9NR63 512 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 DZANK1Q9NVP4 752 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
CASC3-208ENST00000583649 MBLAC1A4D2B0 266 aaPredicted RBP12.83□□□□□ -0.36
CASC3-208ENST00000583649 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 ZNF213O14771 459 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 ASGR2P07307 311 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 CA8P35219 290 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
CASC3-208ENST00000583649 TDGQ13569 410 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 SLC24A5Q71RS6 500 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 OTOP3Q7RTS5 596 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 ABI1Q8IZP0 508 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 EVI5LQ96CN4 794 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
CASC3-208ENST00000583649 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 FAM49AQ9H0Q0 323 aaPredicted RBP12.83□□□□□ -0.36
CASC3-208ENST00000583649 AGO3Q9H9G7 860 aaKnown RBP12.83□□□□□ -0.36
CASC3-208ENST00000583649 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 IGSF9BQ9UPX0 1349 aa12.83□□□□□ -0.36
CASC3-208ENST00000583649 CARNS1A5YM72 827 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 GPR182O15218 404 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 MARK3P27448 753 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 HAND2P61296 217 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 IGBP1P78318 339 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 GIT2Q14161 759 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
CASC3-208ENST00000583649 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 LINC01599Q8WXQ3 324 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 CUL5Q93034 780 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
CASC3-208ENST00000583649 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
CASC3-208ENST00000583649 AZI2Q9H6S1 392 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 DCTPP1Q9H773 170 aa12.82□□□□□ -0.36
CASC3-208ENST00000583649 TYW1Q9NV66 732 aaKnown RBP12.82□□□□□ -0.36
CASC3-208ENST00000583649 KLRF2D3W0D1 207 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 FOXP2O15409 715 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 EOMESO95936 686 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 KRT76Q01546 638 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 ST3GAL2Q16842 350 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 CWF19L1Q69YN2 538 aaKnown RBP12.81□□□□□ -0.36
CASC3-208ENST00000583649 KIAA1841Q6NSI8 718 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 SIX5Q8N196 739 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.365e-7■■■■□ 23.9
CASC3-208ENST00000583649 ZNF558Q96NG5 402 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 HCFC2Q9Y5Z7 792 aa12.81□□□□□ -0.36
CASC3-208ENST00000583649 CACNA1BQ00975 2339 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 OPLAHO14841 1288 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 MX1P20591 662 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 APOBRQ0VD83 1088 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 RSPO4Q2I0M5 234 aaPredicted RBP12.8□□□□□ -0.36
CASC3-208ENST00000583649 RARS2Q5T160 578 aaKnown RBP12.8□□□□□ -0.36
CASC3-208ENST00000583649 CCDC149Q6ZUS6 474 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 LRRC43Q8N309 656 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 MRPL43Q8N983 215 aaKnown RBP12.8□□□□□ -0.36
CASC3-208ENST00000583649 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
CASC3-208ENST00000583649 ELAC1Q9H777 363 aaKnown RBP12.8□□□□□ -0.36
CASC3-208ENST00000583649 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 TMEM161AQ9NX61 479 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 SPG21Q9NZD8 308 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 IGSF9Q9P2J2 1179 aa12.8□□□□□ -0.36
CASC3-208ENST00000583649 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms