RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 DCP1AQ9NPI6 582 aaPredicted RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 CPSF3Q9UKF6 684 aaKnown RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 SEC31AO94979 1220 aaKnown RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 SIX6OS1Q8N1H7 587 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 TAB3Q8N5C8 712 aaPredicted RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 CD209Q9NNX6 404 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 GDAQ9Y2T3 454 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 WDR64B1ANS9 1081 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 GH2P01242 217 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 HSPA8P11142 646 aaKnown RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 RFC1P35251 1148 aaPredicted RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 TTC13Q8NBP0 860 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 ACTR5Q9H9F9 607 aaPredicted RBP17.64■□□□□ 0.41
ERBB2-214ENST00000583038 EPS15L1Q9UBC2 864 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 EXOC1LA0A1B0GW35 172 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 TTI1O43156 1089 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 RXRBP28702 533 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 CXCR5P32302 372 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 SNX1Q13596 522 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 GRM4Q14833 912 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 CLEC17AQ6ZS10 378 aa17.64■□□□□ 0.41
ERBB2-214ENST00000583038 A0A087WUV0 522 aaPredicted RBP17.63■□□□□ 0.41
ERBB2-214ENST00000583038 CLCN6P51797 869 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 HSP90AA5PQ58FG0 334 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 BRINP3Q76B58 766 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 ERICH1Q86X53 443 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 ENAHQ8N8S7 591 aaPredicted RBP17.63■□□□□ 0.41
ERBB2-214ENST00000583038 TMEM35BQ8NCS4 154 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 LRGUKQ96M69 825 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 PRELPP51888 382 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 TFDP2Q14188 446 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 CTTNQ14247 550 aaKnown RBP17.63■□□□□ 0.41
ERBB2-214ENST00000583038 ZNF667Q5HYK9 610 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 SH3RF3Q8TEJ3 882 aaPredicted RBP17.63■□□□□ 0.41
ERBB2-214ENST00000583038 RBM41Q96IZ5 413 aaKnown RBP17.63■□□□□ 0.41
ERBB2-214ENST00000583038 ZMYND12Q9H0C1 365 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 TXLNGQ9NUQ3 528 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 NR1D1P20393 614 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 PRDX5P30044 214 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 RCSD1Q6JBY9 416 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 C7orf31Q8N865 590 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 KLHL29Q96CT2 875 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 EDEM3Q9BZQ6 932 aa17.63■□□□□ 0.41
ERBB2-214ENST00000583038 ZMYND10O75800 440 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 MMP10P09238 476 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ARL13BQ3SXY8 428 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 EFHD1Q9BUP0 239 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 LY9Q9HBG7 655 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 MED14O60244 1454 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ORC4O43929 436 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 RFX1P22670 979 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 CRKP46108 304 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 PEX3P56589 373 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 TMED2Q15363 201 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
ERBB2-214ENST00000583038 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
ERBB2-214ENST00000583038 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 PNPLA7Q6ZV29 1317 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 TJP3O95049 919 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ZBED1O96006 694 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 SFNP31947 248 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ABHD10Q9NUJ1 306 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ABCB11O95342 1321 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 NEDD4P46934 1319 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 IQANK1A0A1B0GTG1 560 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 HOXA13P31271 388 aaPredicted RBP17.62■□□□□ 0.41
ERBB2-214ENST00000583038 ZNF341Q9BYN7 854 aa17.62■□□□□ 0.41
ERBB2-214ENST00000583038 XPAP23025 273 aaPredicted RBP17.61■□□□□ 0.41
ERBB2-214ENST00000583038 SERPINB6P35237 376 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 THOC5Q13769 683 aaKnown RBP17.61■□□□□ 0.41
ERBB2-214ENST00000583038 PCGF5Q86SE9 256 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 SCYL3Q8IZE3 742 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 RAD54LQ92698 747 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 HINFPQ9BQA5 517 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 NR3C1P04150 777 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 KRT39Q6A163 491 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 NUDCD1Q96RS6 583 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 ANGPTL3Q9Y5C1 460 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 MROH7-TTC4A0A0A0MT08 1334 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 CAV1Q03135 178 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 TNFAIP2Q03169 654 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 ZNF449Q6P9G9 518 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 COL15A1P39059 1388 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 F8W8V4 182 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 OPHN1O60890 802 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 MTMR1Q13613 665 aa17.61■□□□□ 0.41
ERBB2-214ENST00000583038 SRRM1Q8IYB3 904 aaKnown RBP17.61■□□□□ 0.41
ERBB2-214ENST00000583038 MGEA5O60502 916 aa17.6■□□□□ 0.41
ERBB2-214ENST00000583038 ZRANB2O95218 330 aaKnown RBP eCLIP17.6■□□□□ 0.41
ERBB2-214ENST00000583038 NR1H3Q13133 447 aa17.6■□□□□ 0.41
ERBB2-214ENST00000583038 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
ERBB2-214ENST00000583038 CYB5R4Q7L1T6 521 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms