RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ATP2B1P20020 1258 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 MARCH8Q5T0T0 291 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 VWCEQ96DN2 955 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 FAM20AQ96MK3 541 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 KCNMB3Q9NPA1 279 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 MBLAC1A4D2B0 266 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 TBX3O15119 743 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 NBNO60934 754 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 BAG4O95429 457 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 ATP4AP20648 1035 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 GJB2P29033 226 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 TRAF7Q6Q0C0 670 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 RDM1Q8NG50 284 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 BBXQ8WY36 941 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 FAM167AQ96KS9 214 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 FAM49AQ9H0Q0 323 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 FOXP1Q9H334 677 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 CXXC1Q9P0U4 656 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 SMC3Q9UQE7 1217 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 SLC4A7Q9Y6M7 1214 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 COL1A2P08123 1366 aa14.2□□□□□ -0.14
SMARCE1-218ENST00000582955 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 NEMFO60524 1076 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 PRKCEQ02156 737 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 MBTPS1Q14703 1052 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 GPNMBQ14956 572 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 CALCRLQ16602 461 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 UGCGQ16739 394 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 CNKSR3Q6P9H4 555 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 SLFN12Q8IYM2 578 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 HAS1Q92839 578 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 VAV3Q9UKW4 847 aa14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 MYH9P35579 1960 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-218ENST00000582955 GRXCR1A8MXD5 290 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 H3BQV1 296 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 WNT7AO00755 349 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 ZNF862O60290 1169 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 CXCL10P02778 98 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 OATP04181 439 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 RPLP2P05387 115 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 KLRC1P26715 233 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 MCM7P33993 719 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 PPP2R5CQ13362 524 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 MTHFD1LQ6UB35 978 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 B3GNT9Q6UX72 402 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 RPAINQ86UA6 219 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 NRBP2Q9NSY0 501 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 CEP131Q9UPN4 1083 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 PCDHA2Q9Y5H9 948 aa14.18□□□□□ -0.14
SMARCE1-218ENST00000582955 SZT2Q5T011 3432 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 TET1Q8NFU7 2136 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 SMIM35A0A1B0GVV1 85 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 KIF28PB7ZC32 967 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 M0QZ92 97 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 EML1O00423 815 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 KCNJ6P48051 423 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 TMEM62Q0P6H9 643 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 FAM26DQ5JW98 314 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 TTC38Q5R3I4 469 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 PCDHA12Q9UN75 941 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 CDY2AQ9Y6F7 541 aa14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 LAMA2P24043 3122 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-218ENST00000582955 ZBTB42B2RXF5 422 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 CHRNA1P02708 482 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 GHRP10912 638 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 DNAJB2P25686 324 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 TXKP42681 527 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 PSMC5P62195 406 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 MGAT3Q09327 533 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 IKBKEQ14164 716 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 ZNF174Q15697 407 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 TCTN1Q2MV58 587 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 ZNF697Q5TEC3 545 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 IER5Q5VY09 327 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 Q7L0L9 218 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
SMARCE1-218ENST00000582955 DBF4BQ8NFT6 615 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms