RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 EDAQ92838 391 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
SS18-222ENST00000582792 AZI2Q9H6S1 392 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
SS18-222ENST00000582792 CLEC1BQ9P126 229 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 PADI3Q9ULW8 664 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 PCDHA6Q9UN73 950 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 PCDHA8Q9Y5H6 950 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 PCDHA2Q9Y5H9 948 aa15.53■□□□□ 0.08
SS18-222ENST00000582792 RBM8AQ9Y5S9 174 aaKnown RBP15.53■□□□□ 0.08
SS18-222ENST00000582792 TECTAO75443 2155 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
SS18-222ENST00000582792 SCG2P13521 617 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 PAK2Q13177 524 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 PAN2Q504Q3 1202 aaKnown RBP15.52■□□□□ 0.08
SS18-222ENST00000582792 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 SMRP1Q8NCR6 262 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 POF1BQ8WVV4 589 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 TMEM87BQ96K49 555 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.08
SS18-222ENST00000582792 TRPC6Q9Y210 931 aa15.52■□□□□ 0.08
SS18-222ENST00000582792 LOXHD1Q8IVV2 1947 aa15.52■□□□□ 0.07
SS18-222ENST00000582792 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 SMIM35A0A1B0GVV1 85 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 hCG_1642624A0A1W2PR95 340 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 CALM1P0DP23 149 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 CALM2P0DP24 149 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 CALM3P0DP25 149 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 RXRAP19793 462 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 TMEM62Q0P6H9 643 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 COASYQ13057 564 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 PLCB4Q15147 1175 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 PLPPR4Q7Z2D5 763 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 BMP8AQ7Z5Y6 402 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 TRAPPC12Q8WVT3 735 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 KCNH7Q9NS40 1196 aa15.51■□□□□ 0.07
SS18-222ENST00000582792 PLXNA4Q9HCM2 1894 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 NFASCO94856 1347 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 GLP2RO95838 553 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 MCM5P33992 734 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 LIFRP42702 1097 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 NRIP1P48552 1158 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 ACTR2P61160 394 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 KRT76Q01546 638 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 FAM43BQ6ZT52 329 aaPredicted RBP15.5■□□□□ 0.07
SS18-222ENST00000582792 NME8Q8N427 588 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 MXRA8Q9BRK3 442 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 TMX1Q9H3N1 280 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 LRFN2Q9ULH4 789 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 USP34Q70CQ2 3546 aa15.5■□□□□ 0.07
SS18-222ENST00000582792 SARSP49591 514 aaKnown RBP15.49■□□□□ 0.07
SS18-222ENST00000582792 GATMP50440 423 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 STAT5BP51692 787 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 CBX2Q14781 532 aaPredicted RBP15.49■□□□□ 0.07
SS18-222ENST00000582792 BMP2KLQ5H9B9 411 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 TRIM67Q6ZTA4 783 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 TMTC3Q6ZXV5 915 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 HEATR3Q7Z4Q2 680 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 RBM23Q86U06 439 aaKnown RBP15.49■□□□□ 0.07
SS18-222ENST00000582792 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 CYP2W1Q8TAV3 490 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 BARX2Q9UMQ3 279 aaPredicted RBP15.49■□□□□ 0.07
SS18-222ENST00000582792 PCDHGC5Q9Y5F6 944 aa15.49■□□□□ 0.07
SS18-222ENST00000582792 TMEM221A6NGB7 291 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 M0R296 226 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 ATG7O95352 703 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 SLC26A2P50443 739 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 UBE3AQ05086 875 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 COL9A3Q14050 684 aaPredicted RBP15.48■□□□□ 0.07
SS18-222ENST00000582792 PKN1Q16512 942 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 TMEM266Q2M3C6 531 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 RAB11FIP4Q86YS3 637 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 FANCBQ8NB91 859 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 ERVK-5Q9HDB9 667 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
SS18-222ENST00000582792 SLC12A7Q9Y666 1083 aa15.48■□□□□ 0.07
SS18-222ENST00000582792 MGEA5O60502 916 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 PPFIA3O75145 1194 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 ARP10275 920 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 KLRC1P26715 233 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 ZXDAP98168 799 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 NFX1Q12986 1120 aaKnown RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 ITGB3BPQ13352 177 aaPredicted RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 FNDC1Q4ZHG4 1894 aaPredicted RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 TEX2Q8IWB9 1127 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 PRSS33Q8NF86 280 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 PBXIP1Q96AQ6 731 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 PHF7Q9BWX1 381 aaPredicted RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 TLE6Q9H808 572 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 AGO4Q9HCK5 861 aaKnown RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 TLR9Q9NR96 1032 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 AAASQ9NRG9 546 aa15.47■□□□□ 0.07
SS18-222ENST00000582792 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
SS18-222ENST00000582792 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms