RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	KIF4A	O95239	1232 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	RAG1	P15918	1043 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	LOR	P23490	312 aa	Predicted RBP	12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	CDK7	P50613	346 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	FPGS	Q05932	587 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	ACVR2B	Q13705	512 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	DIEXF	Q68CQ4	756 aa	Known RBP	12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	KANK3	Q6NY19	840 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	APPBP2	Q92624	585 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	DDX11	Q96FC9	970 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	DCTPP1	Q9H773	170 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	SLC38A10	Q9HBR0	1119 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	STARD7	Q9NQZ5	370 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	MTMR4	Q9NYA4	1195 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	RCAN3	Q9UKA8	241 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	TBX21	Q9UL17	535 aa		12.37	□□□□□ -0.43
NCOR1-222	ENST00000582565	PNMA6F	A0A0J9YX94	578 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	DUSP11	O75319	330 aa	Known RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	P4HB	P07237	508 aa	Known RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	PTGS1	P23219	599 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	CST5	P28325	142 aa	Predicted RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	CNTN2	Q02246	1040 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	PSAPL1	Q6NUJ1	521 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	ELMSAN1	Q6PJG2	1045 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	NPAS4	Q8IUM7	802 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	LRRC47	Q8N1G4	583 aa	Known RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	SEC62	Q99442	399 aa	Known RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.36	□□□□□ -0.43	8e-10	■■□□□ 13.9
NCOR1-222	ENST00000582565	UPF3A	Q9H1J1	476 aa	Known RBP	12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	SALL4	Q9UJQ4	1053 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	STARD13	Q9Y3M8	1113 aa		12.36	□□□□□ -0.43
NCOR1-222	ENST00000582565	ZBED4	O75132	1171 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	TIMP1	P01033	207 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	ASGR1	P07306	291 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	EDN3	P14138	238 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	FOSL2	P15408	326 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	GJA9	P57773	515 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	CCDC144B	Q3MJ40	725 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	PERM1	Q5SV97	790 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	ARMCX2	Q7L311	632 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	IFNL3	Q8IZI9	196 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	USP38	Q8NB14	1042 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	GMCL1P1	Q8NEA9	526 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	NUP133	Q8WUM0	1156 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	FEM1B	Q9UK73	627 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	DDX49	Q9Y6V7	483 aa	Known RBP	12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	ASTN1	O14525	1302 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	ZNF536	O15090	1300 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	ELP1	O95163	1332 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	NCOR1	O75376	2440 aa		12.35	□□□□□ -0.43
NCOR1-222	ENST00000582565	PLIN4	Q96Q06	1357 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	TMEM265	A0A087WTH1	108 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	GRXCR1	A8MXD5	290 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	DCDC2C	A8MYV0	355 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	FOXP2	O15409	715 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ARHGEF15	O94989	841 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ALB	P02768	609 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	C6orf222	P0C671	652 aa	Predicted RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	TDO2	P48775	406 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	NKX3-2	P78367	333 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ENOX2	Q16206	610 aa	Known RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	TMEM240	Q5SV17	173 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	RASIP1	Q5U651	963 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	SLFN13	Q68D06	897 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	MFSD5	Q6N075	450 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	CCDC144CP	Q8IYA2	1237 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ANKRD35	Q8N283	1001 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	MICALL1	Q8N3F8	863 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	FAM133A	Q8N9E0	248 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	CHST13	Q8NET6	341 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	ABHD16B	Q9H3Z7	469 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	CHMP4B	Q9H444	224 aa	Known RBP	12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	MUC3A	Q02505	3323 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	LCT	P09848	1927 aa		12.34	□□□□□ -0.43
NCOR1-222	ENST00000582565	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	ARVCF	O00192	962 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	TTLL1	O95922	423 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	ZFY	P08048	801 aa	Predicted RBP	12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	BMP3	P12645	472 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	CSF2RA	P15509	400 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	OAZ1	P54368	228 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	BEX3	Q00994	111 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	TMEM63B	Q5T3F8	832 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	RASGRP2	Q7LDG7	609 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	FAM126B	Q8IXS8	530 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	NUDT8	Q8WV74	236 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	PLD4	Q96BZ4	506 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	CHMP4C	Q96CF2	233 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	SMG9	Q9H0W8	520 aa	Known RBP	12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	INCENP	Q9NQS7	918 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	HOMER2	Q9NSB8	354 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	FRRS1L	Q9P0K9	344 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	SYNPO2	Q9UMS6	1093 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	LRRC37A2	A6NM11	1700 aa		12.33	□□□□□ -0.44
NCOR1-222	ENST00000582565	TMEM232	C9JQI7	657 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms