RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MX1P20591 662 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 HOXA13P31271 388 aaPredicted RBP8.82□□□□□ -1
CCDC47-205ENST00000582331 GNPTABQ3T906 1256 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 PAN2Q504Q3 1202 aaKnown RBP8.82□□□□□ -1
CCDC47-205ENST00000582331 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 TSHZ1Q6ZSZ6 1077 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 CYFIP1Q7L576 1253 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 TRIM50Q86XT4 487 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 TBC1D10CQ8IV04 446 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 ATP8B4Q8TF62 1192 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 EVI5LQ96CN4 794 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 WDR70Q9NW82 654 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 PCDHA1Q9Y5I3 950 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 ZMYM6O95789 1325 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 SPATA31C2B4DYI2 1134 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 PPP1R3GB7ZBB8 358 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 ZNF213O14771 459 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 STAM2O75886 525 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 NT5C2P49902 561 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 RBM10P98175 930 aaKnown RBP8.81□□□□□ -1
CCDC47-205ENST00000582331 UBE3AQ05086 875 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 TRAF1Q13077 416 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 DUSP6Q16828 381 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 RUFY4Q6ZNE9 571 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 RTN4RL1Q86UN2 441 aaPredicted RBP8.81□□□□□ -1
CCDC47-205ENST00000582331 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 TMEM105Q8N8V8 129 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 KREMEN2Q8NCW0 462 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 DNAJB3Q8WWF6 145 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 LINC01599Q8WXQ3 324 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 NKD2Q969F2 451 aaPredicted RBP8.81□□□□□ -1
CCDC47-205ENST00000582331 FAM227BQ96M60 508 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 CDCA3Q99618 268 aaPredicted RBP8.81□□□□□ -1
CCDC47-205ENST00000582331 FTHL17Q9BXU8 183 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 S1PR5Q9H228 398 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 AGO3Q9H9G7 860 aaKnown RBP8.81□□□□□ -1
CCDC47-205ENST00000582331 LRFN2Q9ULH4 789 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 PCDHB12Q9Y5F1 795 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
CCDC47-205ENST00000582331 ZDBF2Q9HCK1 2354 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 MYO15AQ9UKN7 3530 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 TTC3P53804 2025 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 A0A0D9SFI3 127 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 ZBTB5O15062 677 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 FIBPO43427 364 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 PPP1R11O60927 126 aaPredicted RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 SRGAP2BP0DMP2 458 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 CD52P31358 61 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 TECP42680 631 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 MRPS6P82932 125 aaKnown RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 MRPS9P82933 396 aaKnown RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 SP4Q02446 784 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 PPFIA1Q13136 1202 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 E2F4Q16254 413 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 SPOUT1Q5T280 376 aaKnown RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 IER5Q5VY09 327 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 MCTP2Q6DN12 878 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 PDE12Q6L8Q7 609 aaKnown RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 ANKRD54Q6NXT1 300 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 TMEM184AQ6ZMB5 413 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 FRMD5Q7Z6J6 570 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 ADSSL1Q8N142 457 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 VN1R2Q8NFZ6 395 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 MTMR8Q96EF0 704 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
CCDC47-205ENST00000582331 AAASQ9NRG9 546 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 RTEL1Q9NZ71 1219 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 SORCS3Q9UPU3 1222 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 NR2E1Q9Y466 385 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 SQORQ9Y6N5 450 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 VPS13AQ96RL7 3174 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 MYH6P13533 1939 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 NEDD4P46934 1319 aa8.8□□□□□ -1
CCDC47-205ENST00000582331 DCHS1Q96JQ0 3298 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 B4E1Z4 1266 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 KLRF2D3W0D1 207 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 FGF18O76093 207 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 RPLP2P05387 115 aaKnown RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 SCG2P13521 617 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 SP100P23497 879 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 GATMP50440 423 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 ERVFC1P60507 584 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 IRX6P78412 446 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 SEMA3FQ13275 785 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 MTMR3Q13615 1198 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 GRIK4Q16099 956 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 SYCE2Q6PIF2 218 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 TICAM2Q86XR7 235 aa8.79□□□□□ -1
CCDC47-205ENST00000582331 ENAHQ8N8S7 591 aaPredicted RBP8.79□□□□□ -1
CCDC47-205ENST00000582331 GIMAP8Q8ND71 665 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms