RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SPATC1LQ9H0A9 340 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 MROH8Q9H579 483 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 HMX1Q9NP08 348 aaPredicted RBP10.3□□□□□ -0.76
SS18-220ENST00000582092 JADE2Q9NQC1 790 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 RLFQ13129 1914 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 RPTORQ8N122 1335 aa10.3□□□□□ -0.76
SS18-220ENST00000582092 ARHGEF35A5YM69 484 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 ATP2A1O14983 1001 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 DKC1O60832 514 aaKnown RBP eCLIP10.29□□□□□ -0.76
SS18-220ENST00000582092 COBLO75128 1261 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 PSMD10O75832 226 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 STAM2O75886 525 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 ARP10275 920 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 ZNF18P17022 549 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 GAP43P17677 238 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 GJA8P48165 433 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 UBXN1Q04323 297 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 LRRC63Q05C16 580 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 COASYQ13057 564 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 CTTNQ14247 550 aaKnown RBP10.29□□□□□ -0.76
SS18-220ENST00000582092 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
SS18-220ENST00000582092 PGM5Q15124 567 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 MTFR1Q15390 333 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 COBLL1Q53SF7 1204 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 TCP11X2Q5H9J9 407 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 FKBP15Q5T1M5 1219 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 MFSD14CQ5VZR4 134 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 DPP9Q86TI2 863 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 NCAPG2Q86XI2 1143 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 GUF1Q8N442 669 aaKnown RBP10.29□□□□□ -0.76
SS18-220ENST00000582092 LENG9Q96B70 501 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
SS18-220ENST00000582092 NAP1L5Q96NT1 182 aaPredicted RBP10.29□□□□□ -0.76
SS18-220ENST00000582092 PORCNQ9H237 461 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 VPS16Q9H269 839 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 KCNH7Q9NS40 1196 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 VAV3Q9UKW4 847 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 COL4A3BPQ9Y5P4 624 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 UBIAD1Q9Y5Z9 338 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 PFASO15067 1338 aa10.29□□□□□ -0.76
SS18-220ENST00000582092 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 SGPL1O95470 568 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 TFRCP02786 760 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 P4HBP07237 508 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 NR3C2P08235 984 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 FCER1AP12319 257 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 CYP11B2P19099 503 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 SFNP31947 248 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 JAK3P52333 1124 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 COPB1P53618 953 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 KRT76Q01546 638 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 GHRHRQ02643 423 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 RAD51AP2Q09MP3 1159 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 STK4Q13043 487 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 TRIM14Q14142 442 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 NR1I3Q14994 352 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 TMEM132BQ14DG7 1078 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 ECM1Q16610 540 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 CCDC144BQ3MJ40 725 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 MORN1Q5T089 497 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 CDKAL1Q5VV42 579 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 SLC30A10Q6XR72 485 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 KCNK18Q7Z418 384 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 CACTINQ8WUQ7 758 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 IWS1Q96ST2 819 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 HTATIP2Q9BUP3 242 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 BHMT2Q9H2M3 363 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 UNC45AQ9H3U1 944 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 AGO4Q9HCK5 861 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 TAB2Q9NYJ8 693 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 TBC1D7Q9P0N9 293 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 BTBD7Q9P203 1132 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 ADD3Q9UEY8 706 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 LIMA1Q9UHB6 759 aaKnown RBP10.28□□□□□ -0.76
SS18-220ENST00000582092 ADAMTS5Q9UNA0 930 aa10.28□□□□□ -0.76
SS18-220ENST00000582092 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.76
SS18-220ENST00000582092 TRIM49BA6NDI0 452 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 AKR1B15C9JRZ8 316 aaPredicted RBP10.27□□□□□ -0.77
SS18-220ENST00000582092 EML1O00423 815 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 CALUO43852 315 aaPredicted RBP10.27□□□□□ -0.77
SS18-220ENST00000582092 CNMDO75829 334 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 GNA14O95837 355 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 ERCC3P19447 782 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 SLC12A3P55017 1021 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 SPIRE1Q08AE8 756 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 KRT31Q15323 416 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 STXBP2Q15833 593 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 ANKRD40Q6AI12 368 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 OTUD6AQ7L8S5 288 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 ABRAQ8N0Z2 381 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms