RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PNMA5Q96PV4 448 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 Q9Y3F1 56 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
SRSF1-204ENST00000581979 ARP10275 920 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 SMPD1P17405 629 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 ITGB8P26012 769 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 FAAP100Q0VG06 881 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 CUL4BQ13620 913 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 LRCH2Q5VUJ6 765 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 NIPA1Q7RTP0 329 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 MTRQ99707 1265 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 NT5C3AQ9H0P0 336 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 PDGFCQ9NRA1 345 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 STK17AQ9UEE5 414 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
SRSF1-204ENST00000581979 BECN2A8MW95 431 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 DCDC2CA8MYV0 355 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 GOLGA6L19H0YKK7 550 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 SLC26A4O43511 780 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 MYL1P05976 194 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 ITGB5P18084 799 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 CCND2P30279 289 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 AMPD3Q01432 767 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 EEPD1Q7L9B9 569 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 TLK2Q86UE8 772 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 FBXO16Q8IX29 292 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-204ENST00000581979 NSUN6Q8TEA1 469 aaKnown RBP14.04□□□□□ -0.16
SRSF1-204ENST00000581979 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 GSDMAQ96QA5 445 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 KBTBD4Q9NVX7 518 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 UBIAD1Q9Y5Z9 338 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-204ENST00000581979 ARVCFO00192 962 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 GAS7O60861 476 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
SRSF1-204ENST00000581979 SPIRE1Q08AE8 756 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 MORC3Q14149 939 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 IQCB1Q15051 598 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 SHHQ15465 462 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
SRSF1-204ENST00000581979 HYIQ5T013 277 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 XRRA1Q6P2D8 792 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 SV2BQ7L1I2 683 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 DNERQ8NFT8 737 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 BPIFA3Q9BQP9 254 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 TEKT3Q9BXF9 490 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 WDR11Q9BZH6 1224 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 AP5M1Q9H0R1 490 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 JADE2Q9NQC1 790 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 TMEM39AQ9NV64 488 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 DACH1Q9UI36 760 aa14.04□□□□□ -0.16
SRSF1-204ENST00000581979 RBM47A0AV96 593 aaKnown RBP14.03□□□□□ -0.16
SRSF1-204ENST00000581979 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
SRSF1-204ENST00000581979 PSMD10O75832 226 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 CABYRO75952 493 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 RPN1P04843 607 aaKnown RBP14.03□□□□□ -0.16
SRSF1-204ENST00000581979 RAG1P15918 1043 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 EDNRBP24530 442 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 BEX3Q00994 111 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 MTMR1Q13613 665 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 DHX8Q14562 1220 aaKnown RBP14.03□□□□□ -0.16
SRSF1-204ENST00000581979 MCM6Q14566 821 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 DEFB123Q8N688 67 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 AOPEPQ8N6M6 819 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 LARP4BQ92615 738 aaKnown RBP14.03□□□□□ -0.16
SRSF1-204ENST00000581979 RAD54LQ92698 747 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 TBX21Q9UL17 535 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 COL6A3P12111 3177 aa14.03□□□□□ -0.16
SRSF1-204ENST00000581979 POTEB3A0JP26 581 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.16
SRSF1-204ENST00000581979 CHMP2AO43633 222 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 MED24O75448 989 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 NR3C2P08235 984 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 PPP2R5CQ13362 524 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 ECM1Q16610 540 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 C9orf50Q5SZB4 431 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 TMEM63BQ5T3F8 832 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 FAM109BQ6ICB4 259 aaPredicted RBP14.02□□□□□ -0.16
SRSF1-204ENST00000581979 POTEBQ6S5H4 581 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 NLRX1Q86UT6 975 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 DHX40Q8IX18 779 aaKnown RBP14.02□□□□□ -0.16
SRSF1-204ENST00000581979 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 MLKLQ8NB16 471 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 SLC43A3Q8NBI5 491 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 VTI1AQ96AJ9 217 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 LRRC27Q9C0I9 530 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.16
SRSF1-204ENST00000581979 KCNH7Q9NS40 1196 aa14.02□□□□□ -0.16
SRSF1-204ENST00000581979 PKD2L1Q9P0L9 805 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms