RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 OSBP2Q969R2 916 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
CTC1-208ENST00000581671 ARHGEF3Q9NR81 526 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 MTMR4Q9NYA4 1195 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
CTC1-208ENST00000581671 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 SPTA1P02549 2419 aa11.11□□□□□ -0.63
CTC1-208ENST00000581671 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
CTC1-208ENST00000581671 B4DLN1 442 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 TTLL1O95922 423 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 MCCP23508 829 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 SLC1A4P43007 532 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
CTC1-208ENST00000581671 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 CSRP2Q16527 193 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 GIMAP6Q6P9H5 292 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 RTN4RL1Q86UN2 441 aaPredicted RBP11.1□□□□□ -0.63
CTC1-208ENST00000581671 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 CLEC4DQ8WXI8 215 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
CTC1-208ENST00000581671 GMCL1Q96IK5 515 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 GPR20Q99678 358 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 LZTS1Q9Y250 596 aa11.1□□□□□ -0.63
CTC1-208ENST00000581671 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 TENM4Q6N022 2769 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 RETP07949 1114 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 STAG3L1P0CL83 205 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 SRFP11831 508 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 LAIR1Q6GTX8 287 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 CCDC149Q6ZUS6 474 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 ADAM32Q8TC27 787 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
CTC1-208ENST00000581671 GATA6Q92908 595 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 BCL11AQ9H165 835 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
CTC1-208ENST00000581671 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 CLASP2O75122 1294 aaKnown RBP11.08□□□□□ -0.64
CTC1-208ENST00000581671 KCNK5O95279 499 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 SPINK2P20155 84 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 SLC44A3Q8N4M1 653 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 COLGALT1Q8NBJ5 622 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 PI4K2BQ8TCG2 481 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 APPBP2Q92624 585 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 BCO2Q9BYV7 579 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
CTC1-208ENST00000581671 EPB41L4AQ9HCS5 686 aaPredicted RBP11.08□□□□□ -0.64
CTC1-208ENST00000581671 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 SETD4Q9NVD3 440 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 PUF60Q9UHX1 559 aaKnown RBP11.08□□□□□ -0.64
CTC1-208ENST00000581671 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
CTC1-208ENST00000581671 H3BRB1 525 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 LIMK1P53667 647 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTC1-208ENST00000581671 HSDL1Q3SXM5 330 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 TMC5Q6UXY8 1006 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 TMC7Q7Z402 723 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 PDZD3Q86UT5 571 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 OTUD7AQ8TE49 926 aaPredicted RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 DZANK1Q9NVP4 752 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 WASF3Q9UPY6 502 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
CTC1-208ENST00000581671 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 FREM2Q5SZK8 3169 aa11.07□□□□□ -0.64
CTC1-208ENST00000581671 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
CTC1-208ENST00000581671 M0R2C6 588 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 FOXP2O15409 715 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 SORBS3O60504 671 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 N4BP1O75113 896 aaKnown RBP11.06□□□□□ -0.64
CTC1-208ENST00000581671 ZFYP08048 801 aaPredicted RBP11.06□□□□□ -0.64
CTC1-208ENST00000581671 STARD6P59095 220 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 MGAT3Q09327 533 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 PTPN14Q15678 1187 aa11.06□□□□□ -0.64
CTC1-208ENST00000581671 CCDC6Q16204 474 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms