RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 MAP1BP46821 2468 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 GPR179Q6PRD1 2367 aa16.04■□□□□ 0.16
CSNK1D-219ENST00000581660 CHD8Q9HCK8 2581 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 NEDD4P46934 1319 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 LMNAP02545 664 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 ITIH3Q06033 890 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 IER5Q5VY09 327 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 CASP10Q92851 521 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 TMEM260Q9NX78 707 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 CDH22Q9UJ99 828 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 LRFN2Q9ULH4 789 aa16.03■□□□□ 0.16
CSNK1D-219ENST00000581660 ZBTB5O15062 677 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 ASGR2P07307 311 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 NPR3P17342 541 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 PAK2Q13177 524 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 CES5AQ6NT32 575 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 LLGL2Q6P1M3 1020 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 IQCA1Q86XH1 822 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 THNSL1Q8IYQ7 743 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 DTWD2Q8NBA8 298 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 COLGALT1Q8NBJ5 622 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 MRPS27Q92552 414 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 TMX1Q9H3N1 280 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 NGRNQ9NPE2 291 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 TRPV2Q9Y5S1 764 aa16.02■□□□□ 0.16
CSNK1D-219ENST00000581660 CFAP47Q6ZTR5 3102 aa16.02■□□□□ 0.15
CSNK1D-219ENST00000581660 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 HIDE1A8MVS5 230 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 PI15O43692 258 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 MTHFRP42898 656 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 MCMDC2Q4G0Z9 681 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 KIAA2013Q8IYS2 634 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 TDRD5Q8NAT2 981 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 FLCNQ8NFG4 579 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 TCF25Q9BQ70 676 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 RTP3Q9BQQ7 232 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 ERAP1Q9NZ08 941 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 USP24Q9UPU5 2620 aa16.01■□□□□ 0.15
CSNK1D-219ENST00000581660 A0A0D9SFI3 127 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 LAG3P18627 525 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 MX1P20591 662 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 TCF7P36402 384 aaPredicted RBP16■□□□□ 0.15
CSNK1D-219ENST00000581660 APOBRQ0VD83 1088 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 TRAF1Q13077 416 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
CSNK1D-219ENST00000581660 KCNG4Q8TDN1 519 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 FAM227BQ96M60 508 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 ZSCAN10Q96SZ4 725 aaPredicted RBP16■□□□□ 0.15
CSNK1D-219ENST00000581660 CWH43Q9H720 699 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
CSNK1D-219ENST00000581660 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
CSNK1D-219ENST00000581660 PCDHB7Q9Y5E2 793 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 LOXHD1Q8IVV2 1947 aa16■□□□□ 0.15
CSNK1D-219ENST00000581660 BAHCC1Q9P281 2608 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 RRN3P2A6NIE6 340 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 TBKBP1A7MCY6 615 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 M0QZ92 97 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 ARP10275 920 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 SP4Q02446 784 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 XRRA1Q6P2D8 792 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 ENTPD7Q9NQZ7 604 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 HCSTQ9UBK5 93 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 LIMD1Q9UGP4 676 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
CSNK1D-219ENST00000581660 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 KLRF2D3W0D1 207 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 KIAA1841Q6NSI8 718 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 CELF4Q9BZC1 486 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 RGS18Q9NS28 235 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 C1orf112Q9NSG2 853 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
CSNK1D-219ENST00000581660 DENND4AQ7Z401 1863 aa15.97■□□□□ 0.15
CSNK1D-219ENST00000581660 GSTTP1A0A1W2PQM5 241 aa15.97■□□□□ 0.15
CSNK1D-219ENST00000581660 C9IYK1 514 aa15.97■□□□□ 0.15
CSNK1D-219ENST00000581660 MGEA5O60502 916 aa15.97■□□□□ 0.15
CSNK1D-219ENST00000581660 MARK3P27448 753 aa15.97■□□□□ 0.15
CSNK1D-219ENST00000581660 FAM102BQ5T8I3 360 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms