RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 ORC3Q9UBD5 711 aaPredicted RBP22.77■■□□□ 1.24
SMG8-204ENST00000580498 MICAL3Q7RTP6 2002 aa22.76■■□□□ 1.23
SMG8-204ENST00000580498 MOXD1Q6UVY6 613 aa22.76■■□□□ 1.23
SMG8-204ENST00000580498 FAM43BQ6ZT52 329 aaPredicted RBP22.76■■□□□ 1.23
SMG8-204ENST00000580498 TRPV2Q9Y5S1 764 aa22.76■■□□□ 1.23
SMG8-204ENST00000580498 CDY2AQ9Y6F7 541 aa22.76■■□□□ 1.23
SMG8-204ENST00000580498 SQORQ9Y6N5 450 aa22.76■■□□□ 1.23
SMG8-204ENST00000580498 SMIM35A0A1B0GVV1 85 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 DHX15O43143 795 aaKnown RBP22.75■■□□□ 1.23
SMG8-204ENST00000580498 MARCH6O60337 910 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 GHRP10912 638 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 Q4G0T1 1027 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 FAM117BQ6P1L5 589 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 CCDC60Q8IWA6 550 aaPredicted RBP22.75■■□□□ 1.23
SMG8-204ENST00000580498 ARNTL2Q8WYA1 636 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 IL17RAQ96F46 866 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 YME1L1Q96TA2 773 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 NRBP2Q9NSY0 501 aa22.75■■□□□ 1.23
SMG8-204ENST00000580498 CHRNA1P02708 482 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 TAP1Q03518 808 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 MARCH8Q5T0T0 291 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 MTHFD1LQ6UB35 978 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 TSHZ1Q6ZSZ6 1077 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 RDM1Q8NG50 284 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 PPM1EQ8WY54 764 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 UIMC1Q96RL1 719 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 FTHL17Q9BXU8 183 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 DISC1Q9NRI5 854 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
SMG8-204ENST00000580498 GABBR1Q9UBS5 961 aa22.74■■□□□ 1.23
SMG8-204ENST00000580498 MSH4O15457 936 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 GCFC2P16383 781 aaKnown RBP22.73■■□□□ 1.23
SMG8-204ENST00000580498 KLRC1P26715 233 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 TMOD1P28289 359 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 ZNF710Q8N1W2 664 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 GTF3C6Q969F1 213 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 TGS1Q96RS0 853 aaKnown RBP22.73■■□□□ 1.23
SMG8-204ENST00000580498 PHF20Q9BVI0 1012 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 DDX25Q9UHL0 483 aaKnown RBP22.73■■□□□ 1.23
SMG8-204ENST00000580498 KCNJ14Q9UNX9 436 aa22.73■■□□□ 1.23
SMG8-204ENST00000580498 MAFBQ9Y5Q3 323 aaPredicted RBP22.73■■□□□ 1.23
SMG8-204ENST00000580498 CYP3A7-CYP3A51PA0A087WV96 503 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 MAGEB2O15479 319 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 CHMP2AO43633 222 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 CYP3A7P24462 503 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 MGAT3Q09327 533 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 LETM2Q2VYF4 491 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 FBXO47Q5MNV8 452 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.72■■□□□ 1.23
SMG8-204ENST00000580498 MIER3Q7Z3K6 550 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 NEK8Q86SG6 692 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 MICALL1Q8N3F8 863 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 SLC5A5Q92911 643 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 AIFM3Q96NN9 605 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 SAMD11Q96NU1 681 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 CERS4Q9HA82 394 aa22.72■■□□□ 1.23
SMG8-204ENST00000580498 UPF2Q9HAU5 1272 aaKnown RBP22.72■■□□□ 1.23
SMG8-204ENST00000580498 ADAMTS3O15072 1205 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 DKC1O60832 514 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMG8-204ENST00000580498 UPP2O95045 317 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 KRT2P35908 639 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 PAK2Q13177 524 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 LPIN1Q14693 890 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 INF2Q27J81 1249 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 METTL13Q8N6R0 699 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 IL27Q8NEV9 243 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 TRAPPC12Q8WVT3 735 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 TOP1MTQ969P6 601 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 LENG9Q96B70 501 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 MAP7D2Q96T17 732 aa22.71■■□□□ 1.23
SMG8-204ENST00000580498 CELF4Q9BZC1 486 aaKnown RBP22.71■■□□□ 1.23
SMG8-204ENST00000580498 TRMT1LQ7Z2T5 733 aaKnown RBP22.7■■□□□ 1.22
SMG8-204ENST00000580498 TMCO2Q7Z6W1 182 aaPredicted RBP22.7■■□□□ 1.22
SMG8-204ENST00000580498 GINS2Q9Y248 185 aa22.7■■□□□ 1.22
SMG8-204ENST00000580498 COL6A3P12111 3177 aa22.7■■□□□ 1.22
SMG8-204ENST00000580498 PTPRSQ13332 1948 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 IGSF9BQ9UPX0 1349 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 KDM3AQ9Y4C1 1321 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 M0R2N6 131 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 DLL1O00548 723 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 BAG4O95429 457 aaKnown RBP22.69■■□□□ 1.22
SMG8-204ENST00000580498 TDP2O95551 362 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 OATP04181 439 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 TMEM62Q0P6H9 643 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 SAFBQ15424 915 aaKnown RBP eCLIP22.69■■□□□ 1.22
SMG8-204ENST00000580498 SKIV2LQ15477 1246 aaKnown RBP22.69■■□□□ 1.22
SMG8-204ENST00000580498 ME3Q16798 604 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 TCTN1Q2MV58 587 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 PIK3AP1Q6ZUJ8 805 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 NECAB1Q8N987 351 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 SYMPKQ92797 1274 aaKnown RBP22.69■■□□□ 1.22
SMG8-204ENST00000580498 FAM20AQ96MK3 541 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 LIMCH1Q9UPQ0 1083 aa22.69■■□□□ 1.22
SMG8-204ENST00000580498 CCNT1O60563 726 aaKnown RBP22.68■■□□□ 1.22
SMG8-204ENST00000580498 STAG3L1P0CL83 205 aa22.68■■□□□ 1.22
SMG8-204ENST00000580498 CCDC85BQ15834 202 aaPredicted RBP22.68■■□□□ 1.22
SMG8-204ENST00000580498 PPP4R3AQ6IN85 833 aa22.68■■□□□ 1.22
SMG8-204ENST00000580498 THEGQ9P2T0 379 aa22.68■■□□□ 1.22
SMG8-204ENST00000580498 RWDD3Q9Y3V2 267 aa22.68■■□□□ 1.22
SMG8-204ENST00000580498 LINC01553A4QN01 128 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms